Factsheet for GSMUA_AchrUn_randomP16960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21430_001	Banana	cytosol	75.35	23.46
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	65.49	21.14
VIT_07s0005g00590.t01	Wine grape	cytosol	64.79	20.26
Zm00001d047501_P001	Maize	plastid	62.68	19.96
PGSC0003DMT400081378	Potato	cytosol	63.38	19.87
TraesCS7D01G334900.2	Wheat	plastid	61.97	19.73
EER94877	Sorghum	cytosol, plastid	61.97	19.69
TraesCS7A01G344600.1	Wheat	plastid	61.97	19.69
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	63.38	19.61
TraesCS7B01G238500.1	Wheat	cytosol, plastid	61.97	19.6
Zm00001d029105_P001	Maize	plastid	61.27	19.51
Solyc09g075180.2.1	Tomato	cytosol	61.97	19.47
HORVU7Hr1G080580.2	Barley	plastid	63.38	18.67
AT2G47590.1	Thale cress	cytosol	57.75	18.34
KRH69286	Soybean	plastid	59.86	18.28
CDY71211	Canola	cytosol	57.75	18.18
CDY71236	Canola	cytosol	57.75	18.02
Bra004444.1-P	Field mustard	cytosol	56.34	17.58
CDX80119	Canola	endoplasmic reticulum	57.75	14.99
GSMUA_Achr1P10510_001	Banana	plastid	26.76	6.8
GSMUA_Achr8P26060_001	Banana	cytosol	21.83	5.95
GSMUA_Achr5P18570_001	Banana	cytosol	16.2	3.44
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	15.49	3.35
GSMUA_Achr6P02100_001	Banana	cytosol, plastid	15.49	3.15
GSMUA_AchrUn_...	Banana	plastid	5.63	2.46

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP16960_001	EnsemblPlants:GSMUA_AchrUn_randomT16960_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG16960_001	Gene3D:1.25.40.80	InterPro:Crypto/Photolyase_FAD-like_sf	PANTHER:PTHR11455
PANTHER:PTHR11455:SF2	SUPFAM:SSF48173	UniParc:UPI0002959D5A	UniProt:M0U9V5	MapMan:35.1	:

Description

Blue-light photoreceptor PHR2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16960_001]

Coordinates

chrchrUn_random:+:80185211..80186227

Molecular Weight (calculated)

15551.8 Da

IEP (calculated)

9.789

GRAVY (calculated)

-0.187

Length

142 amino acids

Sequence
(BLAST)

001: MAYYVAQDGK PVMSASLVGG ENEALERLKK FAAECCAQPN KGNRDNTRNS IYGANFSCKI SPWLAMGCLS PRFMLARLKK TATRTISAAV SQTNGVDSTD
101: GGMNWLMFEL LWRDFFRFIT KKYSSTKKAE AVPASACTGA LV

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.