Factsheet for GSMUA_AchrUn_randomP16950_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21430_001	Banana	cytosol	74.15	52.85
TraesCS7D01G334900.2	Wheat	plastid	54.46	39.69
TraesCS7A01G344600.1	Wheat	plastid	54.46	39.6
Zm00001d029105_P001	Maize	plastid	52.92	38.56
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	53.85	38.13
EER94877	Sorghum	cytosol, plastid	52.31	38.03
Zm00001d047501_P001	Maize	plastid	51.69	37.67
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	50.77	37.5
VIT_07s0005g00590.t01	Wine grape	cytosol	52.0	37.22
TraesCS7B01G238500.1	Wheat	cytosol, plastid	51.38	37.19
Solyc09g075180.2.1	Tomato	cytosol	51.38	36.95
PGSC0003DMT400081378	Potato	cytosol	51.08	36.64
KRH69286	Soybean	plastid	50.77	35.48
HORVU7Hr1G080580.2	Barley	plastid	52.0	35.06
CDY71236	Canola	cytosol	48.0	34.29
AT2G47590.1	Thale cress	cytosol	47.08	34.23
CDY71211	Canola	cytosol	47.38	34.15
Bra004444.1-P	Field mustard	cytosol	47.69	34.07
CDX80119	Canola	endoplasmic reticulum	36.31	21.57
GSMUA_Achr1P10510_001	Banana	plastid	30.15	17.53
GSMUA_Achr8P26060_001	Banana	cytosol	16.0	9.98
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	15.69	7.77
GSMUA_Achr5P18570_001	Banana	cytosol	16.0	7.77
GSMUA_Achr6P02100_001	Banana	cytosol, plastid	13.23	6.16
GSMUA_AchrUn_...	Banana	cytosol	2.46	5.63

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP16950_001	EnsemblPlants:GSMUA_AchrUn_randomT16950_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG16950_001	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_N_sf
InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2
PFAM:PF00875	PFscan:PS51645	SEG:seg	SUPFAM:SSF52425	UniParc:UPI000295BF75	UniProt:M0U9V4
MapMan:35.1	:	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16950_001]

Coordinates

chrchrUn_random:+:80173744..80174844

Molecular Weight (calculated)

36246.2 Da

IEP (calculated)

7.171

GRAVY (calculated)

-0.244

Length

325 amino acids

Sequence
(BLAST)

001: MSLLPSHLSP FSSSHSPSPK HSLSAFHSQL KFNIPSQISS LSLSLFSPHS KPSSRLCTPS KISNFLLLSP SSFLRRRHSD PAAGATARRC SLVWFRADLR
101: LHDHEALSAA NADSLSLLPV FLFDPRDFGR SPTGFDRTGP YRARFIIDSV AELRRGLRRR GSDLVVRIGR PEVVLPELAR AAGADAVYAH REVSHDEARV
201: EERIAKAMEA EGVEVKYFWG STLYHIDDLP FELENMPTNY GGFREKVKGV TVRKAIDTPE EVKGLPLRGD IEPGEIPSLQ DLGLNPPPTM SQDSLSEAIV
301: VISAKEIIIY VQEYYWMFHE VSLLD

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.