Factsheet for GSMUA_Achr5P21430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	23.46	75.35
GSMUA_AchrUn_...	Banana	plastid	52.85	74.15
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	57.24	59.32
VIT_07s0005g00590.t01	Wine grape	cytosol	58.11	58.37
Zm00001d029105_P001	Maize	plastid	56.14	57.4
TraesCS7D01G334900.2	Wheat	plastid	56.14	57.4
TraesCS7A01G344600.1	Wheat	plastid	55.92	57.05
EER94877	Sorghum	cytosol, plastid	55.92	57.05
Zm00001d047501_P001	Maize	plastid	55.04	56.28
Solyc09g075180.2.1	Tomato	cytosol	55.48	55.97
PGSC0003DMT400081378	Potato	cytosol	55.48	55.85
TraesCS7B01G238500.1	Wheat	cytosol, plastid	54.82	55.68
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	55.7	55.34
KRH69286	Soybean	plastid	55.92	54.84
AT2G47590.1	Thale cress	cytosol	52.19	53.24
HORVU7Hr1G080580.2	Barley	plastid	55.04	52.07
CDY71211	Canola	cytosol	51.32	51.88
CDY71236	Canola	cytosol	51.75	51.87
Bra004444.1-P	Field mustard	cytosol	51.54	51.65
CDX80119	Canola	endoplasmic reticulum	41.67	34.73
GSMUA_Achr1P10510_001	Banana	plastid	28.29	23.08
GSMUA_Achr8P26060_001	Banana	cytosol	17.76	15.55
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	14.91	10.37
GSMUA_Achr5P18570_001	Banana	cytosol	14.91	10.16
GSMUA_Achr6P02100_001	Banana	cytosol, plastid	14.04	9.17

Protein Annotations

EnsemblPlants:GSMUA_Achr5P21430_001	EnsemblPlants:GSMUA_Achr5T21430_001	EnsemblPlantsGene:GSMUA_Achr5G21430_001	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_FAD-like_sf
InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455
PANTHER:PTHR11455:SF2	PFAM:PF00875	PFscan:PS51645	SEG:seg	SUPFAM:SSF48173	SUPFAM:SSF52425
UniParc:UPI000296EE1B	UniProt:M0T0H2	MapMan:35.1	:	:	:

Description

Blue-light photoreceptor PHR2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21430_001]

Coordinates

chr5:+:23554186..23560279

Molecular Weight (calculated)

49630.7 Da

IEP (calculated)

7.849

GRAVY (calculated)

-0.347

Length

456 amino acids

Sequence
(BLAST)

001: MEANNHPSSS LPSPQTQEDQ QTQPPTTTSL PLATISLSVL PSYVSLFSSS TTSLKSSSFS PFSSHLKIPS QISSLSLSLF SPPSKPHSKL STPSKISNSL
101: LLSPSPIIIR RPADPSAGAA ARRCSIVWFR SDLRLHDHEA LSAANADSLS LLPVFLFDPR DFGRSPAGFD RTGPCRARFL VDSVSDLRAG LRRRGSDLVV
201: RVGRPEVVLP ELARAAGADA VYAHREVSHD EARAEERVAE AMEAEGVEVK YFWGSTLHHV DDLPFDLEHM PTNYGGFREK VKGVSVRKTI ETPEEVRGLP
301: SRGDIEPGEI PSLQDLGLNQ DGKSVTSVPL VGGETEALER LKKFAAECHA QPNDGNKDNT RDNIYGANVS CKISPWLATG CLSPRFMFEE LKKTATRAIS
401: ATSSRRNGVD PADGGMNWLM FELMWRDFFR FITKKCNSSK KKVEGVPATA CAGAVV

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.