Factsheet for TraesCS7B01G238500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G334900.2	Wheat	plastid	88.86	89.46
TraesCS7A01G344600.1	Wheat	plastid	88.2	88.59
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	82.18	80.39
HORVU7Hr1G080580.2	Barley	plastid	85.08	79.25
EER94877	Sorghum	cytosol, plastid	78.4	78.75
Zm00001d029105_P001	Maize	plastid	77.51	78.03
Zm00001d047501_P001	Maize	plastid	77.28	77.8
GSMUA_AchrUn_...	Banana	cytosol	19.6	61.97
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	53.9	55.0
GSMUA_Achr5P21430_001	Banana	cytosol	55.68	54.82
GSMUA_AchrUn_...	Banana	plastid	37.19	51.38
Solyc09g075180.2.1	Tomato	cytosol	50.33	50.0
PGSC0003DMT400081378	Potato	cytosol	49.44	49.01
VIT_07s0005g00590.t01	Wine grape	cytosol	49.22	48.68
KRH69286	Soybean	plastid	50.11	48.39
AT2G47590.1	Thale cress	cytosol	46.55	46.76
CDY71211	Canola	cytosol	45.43	45.23
CDY71236	Canola	cytosol	45.66	45.05
Bra004444.1-P	Field mustard	cytosol	45.43	44.84
CDX80119	Canola	endoplasmic reticulum	42.54	34.92
TraesCS7B01G392900.2	Wheat	plastid	30.29	22.74
TraesCS6B01G257600.2	Wheat	cytosol	15.37	10.62
TraesCS2B01G337900.1	Wheat	cytosol	14.7	9.27
TraesCS6B01G224100.2	Wheat	cytosol	13.36	8.77

Protein Annotations

EnsemblPlants:TraesCS7B01G238500.1	EnsemblPlantsGene:TraesCS7B01G238500	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf
InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2
PFAM:PF00875	PFscan:PS51645	SEG:seg	SUPFAM:SSF48173	SUPFAM:SSF52425	MapMan:35.1

Description

No Description!

Coordinates

chr7B:+:443849368..443852257

Molecular Weight (calculated)

43592.7 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.235

Length

449 amino acids

Sequence
(BLAST)

001: MAAAASDSDP AAHPRDDPSL PFASFSLSLS LRTPXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXAA SLLSPLTASS PGLSRSFPSG
101: APGAAGRRRT LVWFRADLRL HDHEPLHAAV GASSSLLPVF VFDPRDFGKS PSGFDRTGPY RASFLLDSVA DLRRSLRARG GDLVVRVGRP EVVIPELARA
201: AGAEAVYAHG EVSRDECRAE EKVSKAIEKE GVEVKYFWGS TLYHLDDLPF RLNDMPSNYG GFREAVKGLE VRKVLDAPEE VKCVPMKNVL EPGDIPTLGE
301: LGLSAPPAMA QDSKSAAGSN LIGGEAEALE RLKKFAAECC MQPNKAVKDS TQNSIYGANF SCKISPWLAT GCLSPRFMYE ELKKHAIRAI PSGSTPKDGD
401: GTSDAGTNWL MFELLWRDFF RFVTKKYSSP QKTSEVAPAT GCTPAPAFA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.