Factsheet for Os03t0343400-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G344600.1	Wheat	plastid	86.93	89.26
TraesCS7D01G334900.2	Wheat	plastid	86.71	89.24
EER94877	Sorghum	cytosol, plastid	84.97	87.25
Zm00001d029105_P001	Maize	plastid	84.1	86.55
Zm00001d047501_P001	Maize	plastid	83.44	85.87
TraesCS7B01G238500.1	Wheat	cytosol, plastid	80.39	82.18
HORVU7Hr1G080580.2	Barley	plastid	81.92	78.01
GSMUA_AchrUn_...	Banana	cytosol	19.61	63.38
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	54.68	57.05
GSMUA_Achr5P21430_001	Banana	cytosol	55.34	55.7
GSMUA_AchrUn_...	Banana	plastid	38.13	53.85
Solyc09g075180.2.1	Tomato	cytosol	51.42	52.21
PGSC0003DMT400081378	Potato	cytosol	50.76	51.43
VIT_07s0005g00590.t01	Wine grape	cytosol	50.54	51.1
KRH69286	Soybean	plastid	50.98	50.32
AT2G47590.1	Thale cress	cytosol	47.71	48.99
CDY71211	Canola	cytosol	47.06	47.89
CDY71236	Canola	cytosol	47.06	47.47
Bra004444.1-P	Field mustard	cytosol	46.84	47.25
CDX80119	Canola	endoplasmic reticulum	38.78	32.54
Os06t0661800-01	Rice	plastid	29.85	23.62
Os02t0204400-00	Rice	plastid	17.65	14.7
Os02t0573200-01	Rice	cytosol	18.08	11.56
Os02t0625000-01	Rice	cytosol	14.38	10.14
Os04t0452100-02	Rice	cytosol	15.25	10.0

Protein Annotations

Gene3D:1.25.40.80	Gene3D:3.40.50.620	MapMan:35.1	EntrezGene:4332801	ProteinID:ABF95878.1	ProteinID:BAF11991.1
ProteinID:BAS84137.1	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	ProteinID:EAZ26877.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0016829	InterPro:IPR006050	InterPro:IPR014729	EnsemblPlantsGene:Os03g0343400	EnsemblPlants:Os03t0343400-01
PFAM:PF00875	PFscan:PS51645	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2	UniProt:Q10LM1	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF48173	SUPFAM:SSF52425	UniParc:UPI0000DB4626	RefSeq:XP_015630924.1	SEG:seg	:

Description

PHR2Similar to Photolyase/blue-light receptor PHR2. (Os03t0343400-01)

Coordinates

chr3:+:12794533..12797944

Molecular Weight (calculated)

48738.8 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.183

Length

459 amino acids

Sequence
(BLAST)

001: MAAAASDSDS PAAAAARHHD DPTLPAFASF SLSLSLRTPA SPSPAALASV PSTIHLPTQI STLAVCLHPS ASASASPSSR RRLNAAAAAS SLLAPLPAST
101: PGLSRSFPSG APAAAGRRRT LVWFRADLRL HDHEPLHAAV GASSSLLPVF VFDPRDFGKS PSGFDRTGPY RAGFLLDSVA DLRRGLRARG GDLVVRVGRP
201: EVVIPELARA AGAEAVFAHG EVSRDECRAE EKVSKAVEKE GIEVKYFWGS TLYHLDDLPF RLEDMPSNYG GFREAVKGLD VRKVLDAPEE VKCVPMKNVL
301: EPGEIPTLAE LGLTAPPAMA HGSKAAVGST LIGGEAEALE RLKKFASECC MQPNKGDKDS TRDSIYGANF SCKISPWLAT GCLSPRFMYE ELKKHASRAI
401: PSGSTPKNGD GTSDAGTNWL MFELLWRDFF RFITKKYSSA QKTSEVAPAT GCTPTPALA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.