Factsheet for Solyc09g075180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081378	Potato	cytosol	96.46	96.25
VIT_07s0005g00590.t01	Wine grape	cytosol	76.33	75.99
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	70.35	72.27
AT2G47590.1	Thale cress	cytosol	65.71	66.44
KRH69286	Soybean	plastid	66.15	64.3
CDY71211	Canola	cytosol	63.94	64.08
CDY71236	Canola	cytosol	64.38	63.96
Bra004444.1-P	Field mustard	cytosol	63.72	63.3
GSMUA_AchrUn_...	Banana	cytosol	19.47	61.97
GSMUA_Achr5P21430_001	Banana	cytosol	55.97	55.48
TraesCS7A01G344600.1	Wheat	plastid	53.1	53.69
TraesCS7D01G334900.2	Wheat	plastid	52.65	53.36
EER94877	Sorghum	cytosol, plastid	51.11	51.68
Zm00001d029105_P001	Maize	plastid	50.88	51.57
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	52.21	51.42
GSMUA_AchrUn_...	Banana	plastid	36.95	51.38
Zm00001d047501_P001	Maize	plastid	50.66	51.35
TraesCS7B01G238500.1	Wheat	cytosol, plastid	50.0	50.33
HORVU7Hr1G080580.2	Barley	plastid	51.11	47.93
CDX80119	Canola	endoplasmic reticulum	50.66	41.86
Solyc08g074270.2.1	Tomato	nucleus	28.54	22.36
Solyc12g042910.1.1	Tomato	mitochondrion	17.92	15.03
Solyc12g057040.1.1	Tomato	mitochondrion	15.04	11.66
Solyc09g090100.2.1	Tomato	cytosol	16.15	11.5
Solyc04g074180.2.1	Tomato	cytosol	15.04	10.01

Protein Annotations

EnsemblPlants:Solyc09g075180.2.1	EnsemblPlantsGene:Solyc09g075180.2	Gene3D:1.25.40.80	Gene3D:3.40.50.620	GO:GO:0003674	GO:GO:0003824
GO:GO:0016829	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2	PFAM:PF00875	PFscan:PS51645	SEG:seg
SUPFAM:SSF48173	SUPFAM:SSF52425	UniParc:UPI000276B966	UniProt:K4CV95	MapMan:35.1	:

Description

Blue-light photoreceptor PHR2 [Source:Projected from Arabidopsis thaliana (AT2G47590) UniProtKB/Swiss-Prot;Acc:Q8LB72]

Coordinates

chr9:-:66955920..66959315

Molecular Weight (calculated)

49292.4 Da

IEP (calculated)

8.110

GRAVY (calculated)

-0.400

Length

452 amino acids

Sequence
(BLAST)

001: MDPKNQFSDN SEAQTPQEEQ QQTPILPIAS ISLALSTILP THFLNPPKIS TLFNKPNKVK IPTQVSSLTN LSLSASSLPP TNSKFKSTIS ANPLQNTLTL
101: NPLRPSEPSN AAGLRRASIV WFRNDLRVHD NECLNAAHNE SMSVLAVYCF DPRDYGKSSS GFDKTGPYRA SFLIDSVADL RKNLQARGSD LVVRIGKPET
201: VLVELAKAVG AEAVYAHREV SHDEVKGEDK IDAVMKDEGL EVKYFWGSTL YHVDDLPFKL EQMPTNYGGF REKVQGLEVR KTIEALDQLR GLPARGDVEP
301: GEIPSLVDLG LNPSATMGQN GKSAANASLV GGENEALQRL RKFAAECQAQ PSKENKDGTN DSIYGANFSC KISPWLAMGC LSPRSMFDEL KKSTSRTISA
401: ASAKKDGGSG TGLNWLMYEL LWRDFFRFIT KKYSAAKQNS AAPVTTCVGA AA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.