Factsheet for Bra004444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71236	Canola	cytosol	99.34	99.34
CDY71211	Canola	cytosol	95.38	96.23
AT2G47590.1	Thale cress	cytosol	87.03	88.59
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	64.62	66.82
VIT_07s0005g00590.t01	Wine grape	cytosol	65.71	65.86
PGSC0003DMT400081378	Potato	cytosol	63.52	63.8
Solyc09g075180.2.1	Tomato	cytosol	63.3	63.72
KRH69286	Soybean	plastid	62.42	61.08
CDX80119	Canola	endoplasmic reticulum	70.33	58.5
GSMUA_AchrUn_...	Banana	cytosol	17.58	56.34
GSMUA_Achr5P21430_001	Banana	cytosol	51.65	51.54
TraesCS7A01G344600.1	Wheat	plastid	47.47	48.32
TraesCS7D01G334900.2	Wheat	plastid	47.25	48.21
Zm00001d029105_P001	Maize	plastid	47.03	47.98
GSMUA_AchrUn_...	Banana	plastid	34.07	47.69
EER94877	Sorghum	cytosol, plastid	46.59	47.43
Zm00001d047501_P001	Maize	plastid	46.37	47.31
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	47.25	46.84
TraesCS7B01G238500.1	Wheat	cytosol, plastid	44.84	45.43
HORVU7Hr1G080580.2	Barley	plastid	45.93	43.36
Bra036524.1-P	Field mustard	plastid	30.11	24.82
Bra009798.1-P	Field mustard	cytosol	28.57	23.81
Bra015313.1-P	Field mustard	cytosol	15.82	12.48
Bra030568.1-P	Field mustard	cytosol	16.48	12.12
Bra037880.1-P	Field mustard	cytosol	15.82	10.59
Bra021122.1-P	Field mustard	cytosol	5.71	7.93

Protein Annotations

EnsemblPlants:Bra004444.1	EnsemblPlants:Bra004444.1-P	EnsemblPlantsGene:Bra004444	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_FAD-like_sf
InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455
PANTHER:PTHR11455:SF2	PFAM:PF00875	PFscan:PS51645	SEG:seg	SUPFAM:SSF48173	SUPFAM:SSF52425
UniParc:UPI0002547FDB	UniProt:M4CJR0	MapMan:35.1	:	:	:

Description

AT2G47590 (E=7e-207) PHR2 | PHR2 (photolyase/blue-light receptor 2); DNA photolyase

Coordinates

chrA05:-:148081..149692

Molecular Weight (calculated)

49657.0 Da

IEP (calculated)

7.525

GRAVY (calculated)

-0.292

Length

455 amino acids

Sequence
(BLAST)

001: MESKVVVDGE TKSTEEEEAH AIVTCPCLPI ASLSLSFSPL STTTTQFRFA HLFAHHPNKV KIPTQASYLT HLSLSSLSSP SPPLPSRISF KSTFSANPLH
101: SPLSIVPRRP LDPSSAAALR RSAVVWFRND LRVHDNECLN SANDECLSVL PVYCFDPRDY GKSSSGFDKT GPFRAQFLIE SVSELRKNLE ARGSNLVVRV
201: GKPEAVLVEL AKEIGADAVY AHREVSHDEV KAEGKIESAM KEEGVEVKFF WGSTLYHLDD LPFKVEDLPS NYGAFKDKVE KLEIRKTIAA LDQLKSLPSR
301: GDVQLGDIPS LLDLGINPSA RTSQEGKPTM VGGETEALTR LKSFAADCQA RLAKGGNQKG GNNSVFGANF SCKISPWLAM GSISPRSMFD ELKKTISAST
401: TPSAPRNGPG DTGLNWLMYE LLWRDFFRFI TKKYSSAKTQ VEEPGPATAC TGALA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.