Factsheet for TraesCS7D01G334900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G344600.1	Wheat	plastid	97.31	97.09
TraesCS7B01G238500.1	Wheat	cytosol, plastid	89.46	88.86
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	89.24	86.71
EER94877	Sorghum	cytosol, plastid	84.53	84.34
HORVU7Hr1G080580.2	Barley	plastid	90.81	84.02
Zm00001d047501_P001	Maize	plastid	83.86	83.86
Zm00001d029105_P001	Maize	plastid	83.86	83.86
GSMUA_AchrUn_...	Banana	cytosol	19.73	61.97
KRH31864	Soybean	cytosol, nucleus, plastid, vacuole	56.5	57.27
GSMUA_Achr5P21430_001	Banana	cytosol	57.4	56.14
GSMUA_AchrUn_...	Banana	plastid	39.69	54.46
Solyc09g075180.2.1	Tomato	cytosol	53.36	52.65
VIT_07s0005g00590.t01	Wine grape	cytosol	52.91	51.98
PGSC0003DMT400081378	Potato	cytosol	52.47	51.66
KRH69286	Soybean	plastid	52.24	50.11
AT2G47590.1	Thale cress	cytosol	49.55	49.44
CDY71211	Canola	cytosol	48.43	47.89
CDY71236	Canola	cytosol	48.43	47.47
Bra004444.1-P	Field mustard	cytosol	48.21	47.25
CDX80119	Canola	endoplasmic reticulum	39.69	32.36
TraesCS7D01G476200.1	Wheat	plastid	31.17	23.28
TraesCS6D01G167100.1	Wheat	plastid	18.16	14.86
TraesCS6D01G211700.1	Wheat	cytosol, golgi, mitochondrion, nucleus	15.47	10.57
TraesCS6D01G187200.1	Wheat	cytosol	15.47	9.89
TraesCS2D01G317500.1	Wheat	cytosol	14.8	9.48

Protein Annotations

EnsemblPlants:TraesCS7D01G334900.2	EnsemblPlantsGene:TraesCS7D01G334900	Gene3D:1.25.40.80	Gene3D:3.40.50.620	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf
InterPro:DNA_photolyase_N	InterPro:IPR006050	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR11455	PANTHER:PTHR11455:SF2
PFAM:PF00875	PFscan:PS51645	SEG:seg	SUPFAM:SSF48173	SUPFAM:SSF52425	MapMan:35.1

Description

No Description!

Coordinates

chr7D:+:426747666..426750496

Molecular Weight (calculated)

47689.6 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.201

Length

446 amino acids

Sequence
(BLAST)

001: MAAAASDSDP AAHPRDDPNL PFASFSLSLS LRTPTAPAAT LASVPSAVRL PTQISTLAAC LHPSAASSSP RRATRINAAA ASLLSPLTAS SPGLSRSFPS
101: GAPGAAGRRR TLVWFRADLR LHDHEPLHAA VGASSSLLPV FVFDPRDFGK SPSGFDRTGP YRASFLLDSV ADLRRSLRAR GGDLVVRVGR PEVVIPELAR
201: AAGAEAVYAH GEVSRDECRA EEKVSKAIEK EGVEVKYFWG STLYHLDDLP FRLNDMPSNY GGFREAVKGL EVRKVLDAPE EVKCVPMKNV LEPGDIPTLG
301: ELGLSAPPAM AQDSKSAAGS NLIGGEAEAL ERLKKFAAEC CMQPNKAVKD STQNSIYGAN FSCKISPWLA TGCLSPRFMY EELKKHAIRA IPSKDGDGTS
401: DAGTNWLMFE LLWRDFFRFV TKKYSSAQKT SEVAPATGCT PAPAFA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.