Factsheet for TraesCS7D01G476200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G489800.1	Wheat	plastid	95.14	95.78
HORVU7Hr1G109800.2	Barley	plastid	93.3	93.93
TraesCS7B01G392900.2	Wheat	plastid	93.3	93.14
Os06t0661800-01	Rice	plastid	81.74	84.14
EER90163	Sorghum	plastid	80.07	82.84
Zm00001d046935_P001	Maize	plastid	73.53	81.3
GSMUA_Achr1P10510_001	Banana	plastid	63.32	67.62
PGSC0003DMT400076096	Potato	cytosol, plastid	58.63	64.22
VIT_04s0008g02670.t01	Wine grape	plastid	62.48	63.65
KRH61917	Soybean	plastid	61.81	63.18
AT5G24850.1	Thale cress	plastid	58.79	61.69
Solyc08g074270.2.1	Tomato	nucleus	59.3	61.35
Bra036524.1-P	Field mustard	plastid	56.28	60.87
Bra009798.1-P	Field mustard	cytosol	54.27	59.34
CDX88137	Canola	plastid	55.61	58.45
CDX87114	Canola	golgi	50.42	57.44
CDX87110	Canola	cytosol, mitochondrion, peroxisome, plastid	53.43	55.48
CDY19825	Canola	plastid	56.28	55.35
CDX80473	Canola	plastid	57.45	42.03
TraesCS7D01G334900.2	Wheat	plastid	23.28	31.17
TraesCS6D01G167100.1	Wheat	plastid	22.78	24.95
TraesCS6D01G211700.1	Wheat	cytosol, golgi, mitochondrion, nucleus	22.45	20.52
TraesCS6D01G187200.1	Wheat	cytosol	21.44	18.34
TraesCS2D01G317500.1	Wheat	cytosol	21.11	18.1

Protein Annotations

Gene3D:1.10.579.10	Gene3D:1.25.40.80	Gene3D:3.40.50.620	MapMan:35.1	InterPro:Cry_DASH	InterPro:Crypto/Photolyase_FAD-like_sf
InterPro:Crypto/Photolyase_N_sf	InterPro:Cryptochr/Photolyase_FAD-bd	InterPro:Cryptochrome/DNA_photolyase_1	InterPro:DNA_photolyase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0003913	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	InterPro:IPR006050	InterPro:IPR014729	PFAM:PF00875	PFAM:PF03441
PRINTS:PR00147	PFscan:PS51645	PANTHER:PTHR11455	PANTHER:PTHR11455:SF22	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173
SUPFAM:SSF52425	TIGRFAMs:TIGR02765	EnsemblPlantsGene:TraesCS7D01G476200	EnsemblPlants:TraesCS7D01G476200.1	SEG:seg	:

Description

No Description!

Coordinates

chr7D:+:587846915..587850494

Molecular Weight (calculated)

65527.2 Da

IEP (calculated)

10.029

GRAVY (calculated)

-0.376

Length

597 amino acids

Sequence
(BLAST)

001: MLHHHLLSSS ASSFPPAAAQ SLLLLPRQPA ARLRALLAMA EAASTSTSSS TSIPFRPPRA VLAAAVPSLG PDETAAAAYE AFRRHTSTGL RRGGGGVAVV
101: WFRSDLRVLD NEALARAWAA SGAVLPVYCV DPRALAGATH RFGFPKTGAL RAQFLIECLG DLKQNLQKRG LDLLVRHGKP EDILPAIAKA VSAHTVYAHK
201: ETCSEELLVE RLVRRGLEQV AVPRGQGGAS GRSNKPLSPK LQLVWGATMY HVDDLPFPVS NLPDVYTQFR KAVESKSSVR SCGKLPPSLG PAPGSGLDEI
301: GGWGSIPTLE SLGLSVTKSE KGMRFVGGES AALGRVHEYF WKNDQLKVYK ETRNGMLGPD YSTKFSPWLA SGSLSPRYXX XXXXXYEKQR VANDSTYWVL
401: FELIWRDYFR FLSAKYGNSI FHLGGPRKVV SKWSQDQALF ESWKDGRTGY PLIDANMKEL LATGFMSNRG RQIVCSFLVR DMGIDWRMGA EWFETCLLDY
501: DPASNYGNWT YGAGVGNDPR EDRYFSIPKQ AKTYDPDGEY VAYWLPELRS LAKERRNFPG ASYIKQVVPL KFDGGHQRKD QQFNRQTRPK NIYRRQK

Best Arabidopsis Sequence Match ( AT5G24850.1 )
(BLAST)

001: MAASSLSLSS PLSNPLRRFT LHHLHLSKKP LSSSSLFLCS AAKMNDHIHR VPALTEEEID SVAIKTFERY ALPSSSSVKR KGKGVTILWF RNDLRVLDND
101: ALYKAWSSSD TILPVYCLDP RLFHTTHFFN FPKTGALRGG FLMECLVDLR KNLMKRGLNL LIRSGKPEEI LPSLAKDFGA RTVFAHKETC SEEVDVERLV
201: NQGLKRVGNS TKLELIWGST MYHKDDLPFD VFDLPDVYTQ FRKSVEAKCS IRSSTRIPLS LGPTPSVDDW GDVPTLEKLG VEPQEVTRGM RFVGGESAGV
301: GRVFEYFWKK DLLKVYKETR NGMLGPDYST KFSPWLAFGC ISPRFIYEEV QRYEKERVAN NSTYWVLFEL IWRDYFRFLS IKCGNSLFHL GGPRNVQGKW
401: SQDQKLFESW RDAKTGYPLI DANMKELSTT GFMSNRGRQI VCSFLVRDMG LDWRMGAEWF ETCLLDYDPC SNYGNWTYGA GVGNDPREDR YFSIPKQAQN
501: YDPEGEYVAF WLQQLRRLPK EKRHWPGRLM YMDTVVPLKH GNGPMAGGSK SGGGFRGSHS GRRSRHNGP

Arabidopsis Description

CRYDCryptochrome DASH, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84KJ5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.