Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036524.1-P | Field mustard | plastid | 84.89 | 87.5 |
| CDX88137 | Canola | plastid | 86.29 | 86.44 |
| Bra009798.1-P | Field mustard | cytosol | 81.02 | 84.43 |
| CDY19825 | Canola | plastid | 83.66 | 78.42 |
| CDX87114 | Canola | golgi | 71.18 | 77.29 |
| CDX87110 | Canola | cytosol, mitochondrion, peroxisome, plastid | 76.1 | 75.3 |
| PGSC0003DMT400076096 | Potato | cytosol, plastid | 64.15 | 66.97 |
| KRH61917 | Soybean | plastid | 66.61 | 64.9 |
| VIT_04s0008g02670.t01 | Wine grape | plastid | 65.03 | 63.14 |
| Solyc08g074270.2.1 | Tomato | nucleus | 63.27 | 62.39 |
| Os06t0661800-01 | Rice | plastid | 63.09 | 61.9 |
| CDX80473 | Canola | plastid | 88.22 | 61.52 |
| EER90163 | Sorghum | plastid | 62.04 | 61.18 |
| GSMUA_Achr1P10510_001 | Banana | plastid | 59.93 | 61.0 |
| HORVU7Hr1G109800.2 | Barley | plastid | 63.09 | 60.54 |
| TraesCS7A01G489800.1 | Wheat | plastid | 62.39 | 59.87 |
| Zm00001d046935_P001 | Maize | plastid | 56.06 | 59.07 |
| TraesCS7D01G476200.1 | Wheat | plastid | 61.69 | 58.79 |
| TraesCS7B01G392900.2 | Wheat | plastid | 61.69 | 58.7 |
| AT2G47590.1 | Thale cress | cytosol | 24.43 | 31.1 |
| AT3G15620.1 | Thale cress | mitochondrion | 22.32 | 22.84 |
| AT1G04400.1 | Thale cress | cytosol | 21.62 | 20.1 |
| AT4G08920.1 | Thale cress | cytosol | 21.62 | 18.06 |
Protein Annotations
| Gene3D:1.10.579.10 | Gene3D:1.25.40.80 | PDB:2IJG | PDB:2J4D | PDB:2VTB | Gene3D:3.40.50.620 |
| MapMan:35.1 | EntrezGene:832554 | EMBL:AB062926 | ProteinID:AED93369.2 | EMBL:AF069716 | ArrayExpress:AT5G24850 |
| EnsemblPlantsGene:AT5G24850 | RefSeq:AT5G24850 | TAIR:AT5G24850 | RefSeq:AT5G24850-TAIR-G | EnsemblPlants:AT5G24850.1 | TAIR:AT5G24850.1 |
| EMBL:AY065032 | EMBL:AY102138 | Unigene:At.19735 | Symbol:CRY3 | InterPro:Cry_DASH | InterPro:Crypto/Photolyase_FAD-like_sf |
| InterPro:Crypto/Photolyase_N_sf | InterPro:Cryptochr/Photolyase_FAD-bd | InterPro:Cryptochrome/DNA_photolyase_1 | InterPro:DNA_photolyase_N | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003913 | GO:GO:0004871 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009881 |
| GO:GO:0009987 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0038023 | GO:GO:0050896 | InterPro:IPR006050 |
| InterPro:IPR014729 | RefSeq:NP_568461.3 | PFAM:PF00875 | PFAM:PF03441 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00147 |
| PFscan:PS51645 | PANTHER:PTHR11455 | PANTHER:PTHR11455:SF22 | UniProt:Q84KJ5 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF48173 |
| SUPFAM:SSF52425 | TIGRFAMs:TIGR02765 | UniParc:UPI0000D72107 | SEG:seg | : | : |
Description
CRYDCryptochrome DASH, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84KJ5]
Coordinates
chr5:-:8535258..8538211
Molecular Weight (calculated)
64986.7 Da
IEP (calculated)
9.443
GRAVY (calculated)
-0.462
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSLSLSS PLSNPLRRFT LHHLHLSKKP LSSSSLFLCS AAKMNDHIHR VPALTEEEID SVAIKTFERY ALPSSSSVKR KGKGVTILWF RNDLRVLDND
101: ALYKAWSSSD TILPVYCLDP RLFHTTHFFN FPKTGALRGG FLMECLVDLR KNLMKRGLNL LIRSGKPEEI LPSLAKDFGA RTVFAHKETC SEEVDVERLV
201: NQGLKRVGNS TKLELIWGST MYHKDDLPFD VFDLPDVYTQ FRKSVEAKCS IRSSTRIPLS LGPTPSVDDW GDVPTLEKLG VEPQEVTRGM RFVGGESAGV
301: GRVFEYFWKK DLLKVYKETR NGMLGPDYST KFSPWLAFGC ISPRFIYEEV QRYEKERVAN NSTYWVLFEL IWRDYFRFLS IKCGNSLFHL GGPRNVQGKW
401: SQDQKLFESW RDAKTGYPLI DANMKELSTT GFMSNRGRQI VCSFLVRDMG LDWRMGAEWF ETCLLDYDPC SNYGNWTYGA GVGNDPREDR YFSIPKQAQN
501: YDPEGEYVAF WLQQLRRLPK EKRHWPGRLM YMDTVVPLKH GNGPMAGGSK SGGGFRGSHS GRRSRHNGP
101: ALYKAWSSSD TILPVYCLDP RLFHTTHFFN FPKTGALRGG FLMECLVDLR KNLMKRGLNL LIRSGKPEEI LPSLAKDFGA RTVFAHKETC SEEVDVERLV
201: NQGLKRVGNS TKLELIWGST MYHKDDLPFD VFDLPDVYTQ FRKSVEAKCS IRSSTRIPLS LGPTPSVDDW GDVPTLEKLG VEPQEVTRGM RFVGGESAGV
301: GRVFEYFWKK DLLKVYKETR NGMLGPDYST KFSPWLAFGC ISPRFIYEEV QRYEKERVAN NSTYWVLFEL IWRDYFRFLS IKCGNSLFHL GGPRNVQGKW
401: SQDQKLFESW RDAKTGYPLI DANMKELSTT GFMSNRGRQI VCSFLVRDMG LDWRMGAEWF ETCLLDYDPC SNYGNWTYGA GVGNDPREDR YFSIPKQAQN
501: YDPEGEYVAF WLQQLRRLPK EKRHWPGRLM YMDTVVPLKH GNGPMAGGSK SGGGFRGSHS GRRSRHNGP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.