Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21853 | Canola | mitochondrion, plastid | 88.13 | 86.88 |
| CDY20139 | Canola | cytosol, nucleus, plastid | 85.97 | 85.2 |
| Bra021122.1-P | Field mustard | cytosol | 48.2 | 81.71 |
| VIT_09s0002g05990.t01 | Wine grape | mitochondrion | 74.64 | 77.14 |
| PGSC0003DMT400073684 | Potato | mitochondrion | 73.2 | 75.51 |
| Solyc12g042910.1.1 | Tomato | mitochondrion | 73.2 | 75.51 |
| KRH44412 | Soybean | mitochondrion, plastid | 71.4 | 70.52 |
| GSMUA_Achr8P26060_001 | Banana | cytosol | 64.57 | 68.91 |
| TraesCS6D01G167100.1 | Wheat | plastid | 63.85 | 65.14 |
| Os02t0204400-00 | Rice | plastid | 64.03 | 64.61 |
| TraesCS6A01G177000.2 | Wheat | mitochondrion, plastid | 63.67 | 63.78 |
| EES04723 | Sorghum | cytosol, plastid | 62.41 | 63.09 |
| HORVU6Hr1G037460.6 | Barley | plastid | 64.39 | 61.94 |
| Zm00001d015724_P001 | Maize | plastid | 36.87 | 56.32 |
| AT1G04400.1 | Thale cress | cytosol | 26.44 | 24.02 |
| AT5G24850.1 | Thale cress | plastid | 22.84 | 22.32 |
| AT4G08920.1 | Thale cress | cytosol | 25.54 | 20.85 |
| AT2G47590.1 | Thale cress | cytosol | 15.29 | 19.02 |
Protein Annotations
| Gene3D:1.10.579.10 | MapMan:14.9.1 | Gene3D:3.40.50.620 | PDB:3FY4 | EntrezGene:820804 | EMBL:AB003687 |
| ProteinID:AEE75703.1 | ProteinID:AEE75704.1 | ArrayExpress:AT3G15620 | EnsemblPlantsGene:AT3G15620 | RefSeq:AT3G15620 | TAIR:AT3G15620 |
| RefSeq:AT3G15620-TAIR-G | EnsemblPlants:AT3G15620.1 | TAIR:AT3G15620.1 | Unigene:At.188 | ProteinID:BAA34711.1 | ProteinID:BAB02293.1 |
| ncoils:Coil | InterPro:Crypto/Photolyase_FAD-like_sf | InterPro:Crypto/Photolyase_N_sf | InterPro:Cryptochr/Photolyase_FAD-bd | InterPro:DNA_photolyase_N | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003914 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009411 | GO:GO:0009628 |
| GO:GO:0009785 | GO:GO:0009882 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0038023 | InterPro:IPR006050 |
| InterPro:IPR014729 | RefSeq:NP_001030703.1 | RefSeq:NP_566520.1 | UniProt:O48652 | PFAM:PF00875 | PFAM:PF03441 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51645 | PANTHER:PTHR11455 |
| PANTHER:PTHR11455:SF9 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF48173 | SUPFAM:SSF52425 | UniParc:UPI00001633E3 | Symbol:UVR3 |
| SEG:seg | : | : | : | : | : |
Description
UVR3(6-4)DNA photolyase [Source:UniProtKB/Swiss-Prot;Acc:O48652]
Coordinates
chr3:-:5293295..5296811
Molecular Weight (calculated)
63793.6 Da
IEP (calculated)
8.986
GRAVY (calculated)
-0.458
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.