Factsheet for Os02t0204400-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G167100.1	Wheat	plastid	86.39	87.34
EES04723	Sorghum	cytosol, plastid	86.39	86.55
TraesCS6A01G177000.2	Wheat	mitochondrion, plastid	85.48	84.86
Zm00001d015724_P001	Maize	plastid	54.08	81.87
HORVU6Hr1G037460.6	Barley	plastid	85.12	81.14
GSMUA_Achr8P26060_001	Banana	cytosol	69.15	73.13
VIT_09s0002g05990.t01	Wine grape	mitochondrion	65.88	67.47
Bra021122.1-P	Field mustard	cytosol	39.75	66.77
PGSC0003DMT400073684	Potato	mitochondrion	64.25	65.68
Solyc12g042910.1.1	Tomato	mitochondrion	63.88	65.31
AT3G15620.1	Thale cress	mitochondrion	64.61	64.03
KRH44412	Soybean	mitochondrion, plastid	65.34	63.94
CDY20139	Canola	cytosol, nucleus, plastid	64.25	63.1
CDY21853	Canola	mitochondrion, plastid	63.88	62.41
Os02t0625000-01	Rice	cytosol	27.22	23.04
Os06t0661800-01	Rice	plastid	24.14	22.93
Os04t0452100-02	Rice	cytosol	26.5	20.86
Os02t0573200-01	Rice	cytosol	27.04	20.75
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	14.7	17.65

Protein Annotations

Gene3D:1.10.579.10	Gene3D:1.25.40.80	MapMan:14.9.1	Gene3D:3.40.50.620	EntrezGene:4328669	ProteinID:BAD16007.1
ProteinID:BAD38427.1	ProteinID:BAF08157.2	ProteinID:BAS77547.1	InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:Cryptochr/Photolyase_FAD-bd
InterPro:DNA_photolyase_N	ProteinID:EEE56527.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0003914	GO:GO:0005488	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281
GO:GO:0006950	GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0009411	GO:GO:0009628
GO:GO:0009987	GO:GO:0016829	InterPro:IPR006050	InterPro:IPR014729	EnsemblPlantsGene:Os02g0204400	EnsemblPlants:Os02t0204400-00
PFAM:PF00875	PFAM:PF03441	PFscan:PS51645	PANTHER:PTHR11455	PANTHER:PTHR11455:SF9	UniProt:Q0E2Y1
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173	SUPFAM:SSF52425	UniParc:UPI0001B65F6E	RefSeq:XP_015623929.1	SEG:seg

Description

UVR3Similar to (6-4)DNA photolyase. (Os02t0204400-00)

Coordinates

chr2:+:5835504..5838694

Molecular Weight (calculated)

62267.3 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.453

Length

551 amino acids

Sequence
(BLAST)

001: MDAAATAATA TAAAAMVWFR KGLRVHDNPA LDAARRGGAA ARLYPVFVLD PRYLRPDQAA PSPGSARAGV ARVRFLLESL SDLDARLRRL GSRLLLLRAR
101: DDGDVAGTVC AALKDWNIGK LCFESDTEPY ALARDKKVMD FAAASGIDVF SPVSHTLFDP AEIIEKNGGR PPMTYQSFVA IAGEPPEPIM EEYSELPPVG
201: DTGEYELLPV PRVEELGYGD ISQEDLSLFR GGETEALKRM RESLHDKEWV AKFEKPKGDP SAFLKPATTV LSPYLKFGCL SSRYFYHCIQ DIYRSTKKHT
301: NPPVSLTGQL LWRDFFYTVA FGTPNFDQMK GNKICKQIPW TENEELFPAW RDGRTGYPWI DAIMIQLRKW GWMHHLARHS VACFLTRGDL FIHWEKGRDV
401: FERLLIDSDW AINNGNWMWL SCSSFFYQYH RIYSPTSFGK KYDPNGNYIR HFIPVLKDMP KEYIYEPWTA PLSIQKKANC IIGKDYPKPV VDHAIASKEC
501: KKMMGEAYAS NRLDDDKPDK GKSSNSSRRK LSAGSQVTPN SSKTKQLKRS S

Best Arabidopsis Sequence Match ( AT3G15620.1 )
(BLAST)

001: MQRFCVCSPS SYRLNPITSM ATGSGSLIWF RKGLRVHDNP ALEYASKGSE FMYPVFVIDP HYMESDPSAF SPGSSRAGVN RIRFLLESLK DLDSSLKKLG
101: SRLLVFKGEP GEVLVRCLQE WKVKRLCFEY DTDPYYQALD VKVKDYASST GVEVFSPVSH TLFNPAHIIE KNGGKPPLSY QSFLKVAGEP SCAKSELVMS
201: YSSLPPIGDI GNLGISEVPS LEELGYKDDE QADWTPFRGG ESEALKRLTK SISDKAWVAN FEKPKGDPSA FLKPATTVMS PYLKFGCLSS RYFYQCLQNI
301: YKDVKKHTSP PVSLLGQLLW REFFYTTAFG TPNFDKMKGN RICKQIPWNE DHAMLAAWRD GKTGYPWIDA IMVQLLKWGW MHHLARHCVA CFLTRGDLFI
401: HWEQGRDVFE RLLIDSDWAI NNGNWMWLSC SSFFYQFNRI YSPISFGKKY DPDGKYIRHF LPVLKDMPKQ YIYEPWTAPL SVQTKANCIV GKDYPKPMVL
501: HDSASKECKR KMGEAYALNK KMDGKVDEEN LRDLRRKLQK DEHEESKIRN QRPKLK

Arabidopsis Description

UVR3(6-4)DNA photolyase [Source:UniProtKB/Swiss-Prot;Acc:O48652]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.