Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os01t0725800-01 | |
Os02t0625000-01 | |
Os02t0705500-01 | |
Os02t0771100-01 | |
Os03t0309200-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G223700.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 79.11 | 78.87 |
TraesCS6B01G257600.2 | Wheat | cytosol | 78.49 | 78.62 |
TraesCS6D01G211700.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 78.19 | 77.95 |
HORVU6Hr1G058740.2 | Barley | cytosol | 78.34 | 77.74 |
Zm00001d045944_P007 | Maize | cytosol | 73.73 | 73.39 |
EER88355 | Sorghum | mitochondrion | 73.58 | 73.24 |
CDX89827 | Canola | cytosol, mitochondrion | 41.78 | 62.67 |
GSMUA_Achr5P18570_001 | Banana | cytosol | 61.6 | 59.94 |
KRH13218 | Soybean | extracellular | 7.68 | 59.52 |
GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 59.75 | 59.3 |
KRG92422 | Soybean | cytosol | 57.45 | 58.99 |
VIT_05s0049g00960.t01 | Wine grape | cytosol | 58.37 | 58.82 |
CDY18229 | Canola | cytosol, mitochondrion | 51.46 | 58.16 |
KRH69122 | Soybean | cytosol | 53.15 | 57.67 |
KRH34384 | Soybean | cytosol | 56.84 | 57.63 |
Bra015313.1-P | Field mustard | cytosol | 50.84 | 57.37 |
Solyc09g090100.2.1 | Tomato | cytosol | 55.61 | 57.01 |
PGSC0003DMT400044219 | Potato | cytosol | 56.07 | 56.41 |
AT1G04400.1 | Thale cress | cytosol | 52.69 | 56.05 |
CDX86636 | Canola | cytosol | 51.77 | 54.44 |
Bra030568.1-P | Field mustard | cytosol | 51.77 | 54.44 |
CDY15503 | Canola | cytosol | 51.77 | 54.27 |
Os04t0452100-02 | Rice | cytosol | 49.31 | 45.86 |
Os02t0573200-01 | Rice | cytosol | 48.85 | 44.29 |
Os02t0204400-00 | Rice | plastid | 23.04 | 27.22 |
Os06t0661800-01 | Rice | plastid | 19.97 | 22.41 |
Os03t0343400-01 | Rice | cytosol, nucleus, peroxisome, plastid | 10.14 | 14.38 |
Protein Annotations
Description
cryptochrome 2Cryptochrome 2, blue light photoreceptor, Promotion of flowering time (Os02t0625000-01);Similar to Cryptochrome 2. (Os02t0625000-02)
Coordinates
chr2:+:24915862..24922083
Molecular Weight (calculated)
73788.5 Da
IEP (calculated)
5.330
GRAVY (calculated)
-0.310
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSERTVVW FRRDLRIDDN PALASAARDG AVLPVFIWCP ADEGQFYPGR CSRWWLKQSL PHLSQSLESL GCPLVLIRAE STLEALLRCI DSVGATRLVY
101: NHLYDPVSLV RDDKIKKELS ALGISIQSFN GDLLYEPWEI YDDSGLAFTT FNMYWEKCME LPIDASPSLA PWKLVPVPGL ESVRSCSVDD LGLESSKDEE
201: SSNALLMRAW SPGWRNAEKM LEEFVSHGLL EYSKHGMKVE GATTSLLSPY LHFGEVSVRK VYQLVRMQQI KWENEGTSEA EESIHFFMRS IGLREYSRYL
301: CFNFPFTHEK SLLGNLKHYP WKVDEERFKS WRQGMTGYPL VDAGMRELWA TGWTHNRIRV IISSFAVKFL LIPWTWGMKY FWDVLLDADL ESDILGWQYI
401: SGSLPDGHEL SRLDNPEVQG QKYDPDGVYV RTWIPELARM PTEWIHHPWD APSCILEVAG VELGFNYPKP IVDLHIAREC LDDSISTMWQ LDTAEKLAEL
501: DGEVVEDNLS NIKTFDIPKV VLRETSPCAL PIDQRVPHAS SKDHNLKSKV LKASNRSSIC VDMIRSSKME ATSSVANSPV SRKRSFCETA FHVPSYSSSA
601: EVHSHIQDHG GSLVGPSRYL LQEAGRNYVD EVEDSSTADS GSSISRQRKA A
101: NHLYDPVSLV RDDKIKKELS ALGISIQSFN GDLLYEPWEI YDDSGLAFTT FNMYWEKCME LPIDASPSLA PWKLVPVPGL ESVRSCSVDD LGLESSKDEE
201: SSNALLMRAW SPGWRNAEKM LEEFVSHGLL EYSKHGMKVE GATTSLLSPY LHFGEVSVRK VYQLVRMQQI KWENEGTSEA EESIHFFMRS IGLREYSRYL
301: CFNFPFTHEK SLLGNLKHYP WKVDEERFKS WRQGMTGYPL VDAGMRELWA TGWTHNRIRV IISSFAVKFL LIPWTWGMKY FWDVLLDADL ESDILGWQYI
401: SGSLPDGHEL SRLDNPEVQG QKYDPDGVYV RTWIPELARM PTEWIHHPWD APSCILEVAG VELGFNYPKP IVDLHIAREC LDDSISTMWQ LDTAEKLAEL
501: DGEVVEDNLS NIKTFDIPKV VLRETSPCAL PIDQRVPHAS SKDHNLKSKV LKASNRSSIC VDMIRSSKME ATSSVANSPV SRKRSFCETA FHVPSYSSSA
601: EVHSHIQDHG GSLVGPSRYL LQEAGRNYVD EVEDSSTADS GSSISRQRKA A
001: MKMDKKTIVW FRRDLRIEDN PALAAAAHEG SVFPVFIWCP EEEGQFYPGR ASRWWMKQSL AHLSQSLKAL GSDLTLIKTH NTISAILDCI RVTGATKVVF
101: NHLYDPVSLV RDHTVKEKLV ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA AEAIWACSIE ELGLENEAEK
201: PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI
301: CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI
401: SGSIPDGHEL DRLDNPALQG AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL LAKAISRTRE AQIMIGAAPD
501: EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD
601: QITTSLGKNG CK
101: NHLYDPVSLV RDHTVKEKLV ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA AEAIWACSIE ELGLENEAEK
201: PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI
301: CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI
401: SGSIPDGHEL DRLDNPALQG AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL LAKAISRTRE AQIMIGAAPD
501: EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD
601: QITTSLGKNG CK
Arabidopsis Description
CRY2Cryptochrome-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96524]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.