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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G223700.1 Wheat cytosol, golgi, mitochondrion, nucleus 79.11 78.87
TraesCS6B01G257600.2 Wheat cytosol 78.49 78.62
TraesCS6D01G211700.1 Wheat cytosol, golgi, mitochondrion, nucleus 78.19 77.95
HORVU6Hr1G058740.2 Barley cytosol 78.34 77.74
Zm00001d045944_P007 Maize cytosol 73.73 73.39
EER88355 Sorghum mitochondrion 73.58 73.24
CDX89827 Canola cytosol, mitochondrion 41.78 62.67
GSMUA_Achr5P18570_001 Banana cytosol 61.6 59.94
KRH13218 Soybean extracellular 7.68 59.52
GSMUA_AchrUn_... Banana cytosol, nucleus, peroxisome 59.75 59.3
KRG92422 Soybean cytosol 57.45 58.99
VIT_05s0049g00960.t01 Wine grape cytosol 58.37 58.82
CDY18229 Canola cytosol, mitochondrion 51.46 58.16
KRH69122 Soybean cytosol 53.15 57.67
KRH34384 Soybean cytosol 56.84 57.63
Bra015313.1-P Field mustard cytosol 50.84 57.37
Solyc09g090100.2.1 Tomato cytosol 55.61 57.01
PGSC0003DMT400044219 Potato cytosol 56.07 56.41
AT1G04400.1 Thale cress cytosol 52.69 56.05
CDX86636 Canola cytosol 51.77 54.44
Bra030568.1-P Field mustard cytosol 51.77 54.44
CDY15503 Canola cytosol 51.77 54.27
Os04t0452100-02 Rice cytosol 49.31 45.86
Os02t0573200-01 Rice cytosol 48.85 44.29
Os02t0204400-00 Rice plastid 23.04 27.22
Os06t0661800-01 Rice plastid 19.97 22.41
Os03t0343400-01 Rice cytosol, nucleus, peroxisome, plastid 10.14 14.38
Protein Annotations
Gene3D:1.10.579.10Gene3D:1.25.40.80MapMan:26.1.2.1.1Gene3D:3.40.50.620EntrezGene:9270575EMBL:AB103094
EMBL:AK065669ProteinID:BAD23780.1ProteinID:BAD23781.1ProteinID:BAS79853.1ProteinID:BAS79854.1InterPro:Crypto/Photolyase_FAD-like_sf
InterPro:Crypto/Photolyase_N_sfInterPro:Cryptochr/Photolyase_FAD-bdInterPro:Cryptochrome/DNA_photolyase_1InterPro:Cryptochrome_plnInterPro:DNA_photolyase_1_CS_CInterPro:DNA_photolyase_N
ProteinID:EEE57403.1GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005654GO:GO:0005737GO:GO:0005773GO:GO:0006139GO:GO:0006325GO:GO:0006338
GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0007623GO:GO:0008150
GO:GO:0008152GO:GO:0009414GO:GO:0009416GO:GO:0009605GO:GO:0009606GO:GO:0009607
GO:GO:0009628GO:GO:0009637GO:GO:0009638GO:GO:0009646GO:GO:0009653GO:GO:0009719
GO:GO:0009785GO:GO:0009791GO:GO:0009882GO:GO:0009908GO:GO:0009909GO:GO:0009911
GO:GO:0009987GO:GO:0010075GO:GO:0010118GO:GO:0010244GO:GO:0010617GO:GO:0016043
GO:GO:0016604GO:GO:0019725GO:GO:0038023GO:GO:0040007GO:GO:0042752GO:GO:0042802
GO:GO:0048574GO:GO:0051607GO:GO:0071949GO:GO:0072387GO:GO:1901371GO:GO:1902347
GO:GO:2000028GO:GO:2000379InterPro:IPR006050InterPro:IPR014729EnsemblPlantsGene:Os02g0625000EnsemblPlants:Os02t0625000-01
PFAM:PF00875PFAM:PF03441PRINTS:PR00147ScanProsite:PS00394PFscan:PS51645PANTHER:PTHR11455
PANTHER:PTHR11455:SF44UniProt:Q852P4InterPro:Rossmann-like_a/b/a_foldSUPFAM:SSF48173SUPFAM:SSF52425TIGRFAMs:TIGR02766
UniParc:UPI000000262CRefSeq:XP_015625483.1RefSeq:XP_015625484.1SEG:seg::
Description
cryptochrome 2Cryptochrome 2, blue light photoreceptor, Promotion of flowering time (Os02t0625000-01);Similar to Cryptochrome 2. (Os02t0625000-02)
Coordinates
chr2:+:24915862..24922083
Molecular Weight (calculated)
73788.5 Da
IEP (calculated)
5.330
GRAVY (calculated)
-0.310
Length
651 amino acids
Sequence
(BLAST)
001: MAGSERTVVW FRRDLRIDDN PALASAARDG AVLPVFIWCP ADEGQFYPGR CSRWWLKQSL PHLSQSLESL GCPLVLIRAE STLEALLRCI DSVGATRLVY
101: NHLYDPVSLV RDDKIKKELS ALGISIQSFN GDLLYEPWEI YDDSGLAFTT FNMYWEKCME LPIDASPSLA PWKLVPVPGL ESVRSCSVDD LGLESSKDEE
201: SSNALLMRAW SPGWRNAEKM LEEFVSHGLL EYSKHGMKVE GATTSLLSPY LHFGEVSVRK VYQLVRMQQI KWENEGTSEA EESIHFFMRS IGLREYSRYL
301: CFNFPFTHEK SLLGNLKHYP WKVDEERFKS WRQGMTGYPL VDAGMRELWA TGWTHNRIRV IISSFAVKFL LIPWTWGMKY FWDVLLDADL ESDILGWQYI
401: SGSLPDGHEL SRLDNPEVQG QKYDPDGVYV RTWIPELARM PTEWIHHPWD APSCILEVAG VELGFNYPKP IVDLHIAREC LDDSISTMWQ LDTAEKLAEL
501: DGEVVEDNLS NIKTFDIPKV VLRETSPCAL PIDQRVPHAS SKDHNLKSKV LKASNRSSIC VDMIRSSKME ATSSVANSPV SRKRSFCETA FHVPSYSSSA
601: EVHSHIQDHG GSLVGPSRYL LQEAGRNYVD EVEDSSTADS GSSISRQRKA A
Best Arabidopsis Sequence Match ( AT1G04400.1 )
(BLAST)
001: MKMDKKTIVW FRRDLRIEDN PALAAAAHEG SVFPVFIWCP EEEGQFYPGR ASRWWMKQSL AHLSQSLKAL GSDLTLIKTH NTISAILDCI RVTGATKVVF
101: NHLYDPVSLV RDHTVKEKLV ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA AEAIWACSIE ELGLENEAEK
201: PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI
301: CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI
401: SGSIPDGHEL DRLDNPALQG AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL LAKAISRTRE AQIMIGAAPD
501: EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD
601: QITTSLGKNG CK
Arabidopsis Description
CRY2Cryptochrome-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96524]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.