Factsheet for Os01t0725800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0725800-01
Os02t0771100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53090.1	Os01t0725800-01	AT1G53090.1	18812498
AT1G53090.1	Os02t0771100-01	AT2G32950.1	12887588
AT1G53090.1	Os02t0771100-01	AT2G32950.1	18812498
AT1G53090.1	Os02t0771100-01	AT2G32950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0558133-00	Rice	endoplasmic reticulum, extracellular	8.12	87.93
TraesCS3B01G318600.1	Wheat	cytosol	81.69	66.71
TraesCS3A01G284700.2	Wheat	cytosol	82.32	66.71
TraesCS3D01G284500.2	Wheat	cytosol	81.53	66.49
Zm00001d043592_P004	Maize	cytosol	82.96	65.87
OQU87453	Sorghum	cytosol	80.1	65.49
Zm00001d011746_P002	Maize	nucleus	82.01	64.46
HORVU3Hr1G068840.2	Barley	cytosol, mitochondrion	78.34	64.4
Bra038098.1-P	Field mustard	nucleus	27.55	53.23
CDY25880	Canola	nucleus	35.19	47.94
GSMUA_Achr3P31750_001	Banana	nucleus	54.3	44.4
GSMUA_Achr1P13700_001	Banana	nucleus	52.23	42.6
CDY50512	Canola	nucleus	47.29	40.24
Solyc07g063120.2.1	Tomato	cytosol	53.18	40.24
AT1G53090.1	Thale cress	nucleus	49.2	38.92
Bra027259.1-P	Field mustard	nucleus, plastid	49.2	38.92
CDX97654	Canola	nucleus, plastid	49.04	38.74
Bra021100.1-P	Field mustard	nucleus	48.09	38.72
VIT_19s0014g02660.t01	Wine grape	nucleus	56.21	38.71
CDY20122	Canola	nucleus	48.57	38.71
CDX98548	Canola	nucleus, plastid	48.89	38.66
CDY21834	Canola	nucleus, plastid	47.93	38.05
Solyc12g013840.1.1	Tomato	nucleus	51.91	37.82
KRH26155	Soybean	cytosol	47.45	37.82
PGSC0003DMT400039600	Potato	cytosol	51.75	37.44
KRH55275	Soybean	cytosol	47.93	37.44
AT3G15354.3	Thale cress	nucleus	49.84	37.04
VIT_12s0028g03570.t01	Wine grape	cytosol	51.91	36.51
KRH27246	Soybean	plastid	52.55	36.38
KRH22086	Soybean	plastid	51.75	35.87
Os02t0771100-01	Rice	nucleus	22.29	20.44
Os05t0571000-01	Rice	cytosol	32.17	17.66
KRH55271	Soybean	cytosol	1.43	7.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.16	Gene3D:2.130.10.10	EMBL:AK101974	ProteinID:BAD87451.1	ProteinID:BAF06029.2
ProteinID:BAS74124.1	ProteinID:BAT17618.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0725800
EnsemblPlants:Os01t0725800-01	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR44218	PANTHER:PTHR44218:SF1	InterPro:Prot_kinase_dom	UniProt:Q5JM56	SMART:SM00320	SUPFAM:SSF50978
SUPFAM:SSF56112	UniParc:UPI00004C2999	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

SPA3/4-likeWD40/YVTN repeat-like domain containing protein. (Os01t0725800-01)

Coordinates

chr1:+:30257752..30263365

Molecular Weight (calculated)

69234.7 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.408

Length

628 amino acids

Sequence
(BLAST)

001: MEGSRVDAVA GGRRWGEGEE GGRRGGGGGG GGGGGGTGGG GGGGGRRGGE DGGEVSLREW LDRPGRAVEA PECLHVFRQV AESVAIAHAQ GVAVGSARPS
101: CFVVSPPFAR VAFIESASGS DVSGSCSGSD GSEEADPEPS PPRRRRDGAS GGEDRGGKTF PLRSVLAMEL TWYTSPEEAD DRGGATFASD VYRLGVLLFE
201: LFCTFETMEE KMRAMANLRH RVLPPQLLLK WPKEASFCQL LMHPVPETRP KMSDVLQSEF LNRSRNSLEE REAALRLREE IEEQELLLDF LLQLQRRKQD
301: IADNLQDTVA FLSSDINEAH QQSALGQCGN FSFELDKEVC SETVEDQSDC GSRKRFRPEL PAVDMEEQNR SLEECSGTVP SSVLIQESVL SKSSRLMKNF
401: KKLETAYFLT RSKLAKQVGN PVSSCHQVVK RTTGSPVVTE GSSIDDFALE GHYGTRQRGW MNSFLEGLCS YLSFSKLKVK AELKQCDLLN SSNLVCSVGF
501: DRDKEFFATA GVNKKIKVFE YNMIVNEHCD IHYPVVEMSN RSKLSCICWN SYMKSHIASS DFEGIVQVWD VTRSQVFVEM REHERRVWSV DFSLADPTKL
601: VSGSDDGSVK LWNMNQAILF LHLVYVSF

Best Arabidopsis Sequence Match ( AT3G15354.2 )
(BLAST)

001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT VKLWSINQAI LI

Arabidopsis Description

SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.