Factsheet for Bra021100.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20122	Canola	nucleus	99.36	98.35
Bra027259.1-P	Field mustard	nucleus, plastid	88.08	86.52
AT3G15354.3	Thale cress	nucleus	90.13	83.2
Bra038098.1-P	Field mustard	nucleus	29.1	69.85
GSMUA_Achr1P13690_001	Banana	cytosol, mitochondrion, nucleus, plastid	6.41	64.94
KRH55271	Soybean	cytosol	10.13	62.2
Solyc07g063120.2.1	Tomato	cytosol	63.85	60.0
KRH26155	Soybean	cytosol	58.59	57.99
VIT_19s0014g02660.t01	Wine grape	nucleus	67.31	57.57
KRH55275	Soybean	cytosol	59.23	57.46
KRH27246	Soybean	plastid	65.77	56.56
KRH22086	Soybean	plastid	65.13	56.07
Solyc12g013840.1.1	Tomato	nucleus	61.92	56.03
PGSC0003DMT400039600	Potato	cytosol	61.67	55.41
TraesCS3D01G284500.2	Wheat	cytosol	54.36	55.06
TraesCS3B01G318600.1	Wheat	cytosol	54.23	55.01
TraesCS3A01G284700.2	Wheat	cytosol	54.23	54.58
OQU87453	Sorghum	cytosol	53.72	54.56
GSMUA_Achr3P31750_001	Banana	nucleus	53.46	54.3
HORVU3Hr1G068840.2	Barley	cytosol, mitochondrion	52.82	53.93
Zm00001d043592_P004	Maize	cytosol	54.49	53.73
Zm00001d011746_P002	Maize	nucleus	54.23	52.94
GSMUA_Achr1P13700_001	Banana	nucleus	50.51	51.17
Bra021818.1-P	Field mustard	cytosol	7.56	49.58
Os01t0725800-01	Rice	nucleus	38.72	48.09
Bra026485.1-P	Field mustard	cytosol	8.85	34.85
Bra029131.1-P	Field mustard	cytosol	14.87	33.72
Bra005541.1-P	Field mustard	nucleus	26.28	30.64
Bra000420.1-P	Field mustard	nucleus	36.28	29.7
Bra035252.1-P	Field mustard	nucleus	36.28	28.88
Bra004545.1-P	Field mustard	nucleus	36.28	28.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.2	EnsemblPlantsGene:Bra021100
EnsemblPlants:Bra021100.1	EnsemblPlants:Bra021100.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf	UniProt:M4DX54
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44218
PANTHER:PTHR44218:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF56112
UniParc:UPI0002543F9A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

AT3G15354 (E=4e-310) SPA3 | SPA3 (SPA1-RELATED 3); protein binding / signal transducer

Coordinates

chrA01:+:23968855..23972326

Molecular Weight (calculated)

87138.0 Da

IEP (calculated)

6.132

GRAVY (calculated)

-0.352

Length

780 amino acids

Sequence
(BLAST)

001: MEGSSNSNSR GFSDRNTEFP PVDECVRSMF GSSTHKPSSE EEDSLGVDPF VRSLEWGDVS LRQWLDKPER SVDVLECLHV FRQIVEIVNA AHSQGIVVHN
101: VKPSCFVMSS FNHVSFIESA SCSDSGSEDG QKEEKGSYNK IWERQIEKLE EEKKQRCFPM KHVLAMETSW YTSPEEEFGS PSTCASDVYR LGVLLFELFC
201: PVTSREEKSR IMSSLRHRVL PPQILLKCHK EASFCLWLLH PEPTCRPSMS DLLQSDFITE PRDNLVEHEA AIELRDRIEE QESLLEFLLL IQQRKQDSAC
301: SLRDTISLLS SDIEQVVKRQ LILKKQGSSY SDLSKDDHQS PSGPSTLLAS RKRFRQVIPQ VETDVEVDEE SQGSTLLESS RLMRNFKKLE TVYFLTRRRQ
401: MKAAALGKSL TRHSPLSSEN GRGGSMISSV SNPVSNNDPL RQGGWIDPFL EGLCKYLSFS KLRVKADLKQ GDLLNSSNLV CALAFDRDGE LFATAGVNKK
501: IKIFEYNSIV NSNRDIHYPV VELASRSRLS SVCWNSYIKS QIASSNFEGV VQIWDVARSQ LVTEMKEHKK RVWSIDISSA DPTLLASGSD DGTGVSIGTI
601: KTKANICCVQ FPSDSGRSLA FGSADHKVYY YDLRNPKIPL STMVGHNKTV SNVKFVDSST LVSSSTDNML KLWDLSMSAS GVNETPLHSF AGHTNLKNFV
701: GLSVSDGYIA TGSETNEVFV YHKAFPMPVM SYMFSNTDSL SGLEIDDASQ FISSICWRGQ SSTLVAANSN GNIKILEMVA

Best Arabidopsis Sequence Match ( AT3G15354.1 )
(BLAST)

001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT GVSIGTIKTK ANVCCVQFPS DSGRSLAFGS ADHKVYYYDL RNPKIPLCTM
701: IGHSKTVSYV KFVDSSTLVS SSTDNTLKLW DLSMSASGIN ESPLHSFTGH TNLKNFVGLS VSDGYIATGS ETNEVFVYHK AFPMPVMSYM FNNTDSMSGL
801: EVDDASQFIS SICWRGQSST LVAANSNGNI KILEMMT

Arabidopsis Description

SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.