Factsheet for Bra000420.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83371	Canola	nucleus	92.97	99.22
Bra004545.1-P	Field mustard	nucleus	80.59	76.04
AT2G46340.2	Thale cress	nucleus	81.74	75.7
KRH25904	Soybean	mitochondrion	6.51	55.86
Bra021818.1-P	Field mustard	cytosol	5.67	45.38
GSMUA_Achr11P...	Banana	cytosol	37.88	43.81
VIT_15s0046g01310.t01	Wine grape	nucleus	47.01	41.79
PGSC0003DMT400049874	Potato	nucleus	43.55	40.93
KRH06512	Soybean	nucleus	43.34	40.37
Solyc10g011690.2.1	Tomato	nucleus	42.92	40.14
GSMUA_Achr1P28310_001	Banana	nucleus	42.6	39.8
KRH47949	Soybean	nucleus	42.92	39.52
Bra026485.1-P	Field mustard	cytosol	7.87	37.88
Bra035252.1-P	Field mustard	nucleus	38.93	37.86
GSMUA_Achr8P05740_001	Banana	nucleus	41.45	36.85
Bra021100.1-P	Field mustard	nucleus	29.7	36.28
Bra027259.1-P	Field mustard	nucleus, plastid	30.01	36.02
Os05t0571000-01	Rice	cytosol	42.92	35.75
EES19971	Sorghum	cytosol	41.97	35.46
Zm00001d039072_P005	Maize	cytosol	41.34	35.12
Zm00001d009617_P017	Maize	mitochondrion	41.97	34.9
Bra038098.1-P	Field mustard	nucleus	11.23	32.92
Bra029131.1-P	Field mustard	cytosol	11.75	32.56
TraesCS1D01G417600.1	Wheat	cytosol	42.5	31.84
HORVU1Hr1G090080.3	Barley	cytosol	42.5	30.34
Bra005541.1-P	Field mustard	nucleus	21.09	30.04

Protein Annotations

MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.2	EnsemblPlantsGene:Bra000420	EnsemblPlants:Bra000420.1
EnsemblPlants:Bra000420.1-P	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf	UniProt:M4C892
PFAM:PF00069	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR44218	PANTHER:PTHR44218:SF3	InterPro:Prot_kinase_dom	SMART:SM00320	SUPFAM:SSF50978
SUPFAM:SSF56112	UniParc:UPI000253FEB3	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

AT2G46340 (E=0.0) SPA1 | SPA1 (SUPPRESSOR OF PHYA-105 1); protein binding / signal transducer

Coordinates

chrA03:-:11020524..11024132

Molecular Weight (calculated)

106027.0 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.486

Length

953 amino acids

Sequence
(BLAST)

001: MEAVLIGEEA VASSNLQFKG RVDDVPCQLE AGNDCTGSSA DMKNVVDDIN KPPVEESVGG ASSKICVEEL RLVNNRIVNV DSSSSRAGKF EHVYNNNLAQ
101: GSPPAFRLGD GDVDSHMLSR IRQQLAGASS ERLNYINRRS HQNLEAFSQR LRAAGDNSIN MNAPALSSSS FLSAMKGENQ ETPPDFVSGQ DCQENKLDNS
201: KSHIPGNSSH KGHGDGISLR EFLRSSYGKR ERRHGLSLFR QLVELVDSAH SQGLFLVDLR PSLFALVPSK KLRYTGTFGK NNGDEEVNRK RPGTQESSVM
301: GRDLKKRKMD LEAPSTGRPF ERISPVIDLN VVDAYNPDSC ELQQQNYRKS LGVASMTRRK QSMSTWLEEQ WYTCPEEING EDSGEKSNIY ALGVLLFELL
401: CHCESSEMHA AMMADLRHRI LPPAFLSKYP EEAGFCLWLL HPEPSSRPTA REILNSELIS KNDSAITTAA DEEMSELLLH FLSSLEKQKK KNATKLLQDI
501: QTLEDDIKEA EQRYSSNASL VRSHGAIETR VQSSPLDERC TTSSGALFAP AANTDRLMMS NLRQLEDAYF FMRSQMKLSN SAARSDKSLR WSENQNENQE
601: TKTKEKSSDQ VEVFFEGLCK FARYSKFETC GTVRSGDLLN STASVVCSLS FDAEEEHIAA AGISKKIKIF DFNAFMNESV GVQYPLVEMV SKSKLSCVCW
701: NNYIKNYLAS TDYDGVVQIW DAGTGQGFSQ YTEHQKRAWS VDFSPSDPTK FVSGSDDCSV KLWSVNEKRS LGTIWSPANV CCVQFSAYSN HLLAFGSADY
801: KVYCYDLRYV RTPWCTLSGH EKTVSYVKFM DSETIVSAST DNSLKLWNLN KTGLSPGACP LTYKGHTNQK NFVGLSVLDG YIACGSETNE VYSYYKSLPM
901: PMTSYKFGAV DPISGNECFD DNAQFVSSVC WKKKSNMLVA ANSTGNMKLL KLV

Best Arabidopsis Sequence Match ( AT2G46340.2 )
(BLAST)

0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV

Arabidopsis Description

SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.