CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47949	Soybean	nucleus	90.99	9.76
KRH06512	Soybean	nucleus	88.29	9.58
CDX83371	Canola	nucleus	55.86	6.94
KRH60015	Soybean	plasma membrane	52.25	6.91
CDY42035	Canola	nucleus	60.36	6.82
CDX95691	Canola	nucleus	54.95	6.67
CDX80009	Canola	nucleus	59.46	6.67
Bra004545.1-P	Field mustard	nucleus	59.46	6.53
Bra000420.1-P	Field mustard	nucleus	55.86	6.51
VIT_15s0046g01310.t01	Wine grape	nucleus	62.16	6.44
AT2G46340.2	Thale cress	nucleus	58.56	6.32
GSMUA_Achr11P...	Banana	cytosol	45.05	6.07
PGSC0003DMT400049874	Potato	nucleus	54.05	5.92
KRH41290	Soybean	nucleus	54.95	5.9
Solyc10g011690.2.1	Tomato	nucleus	54.05	5.89
GSMUA_Achr1P28310_001	Banana	nucleus	54.05	5.88
KRH73341	Soybean	nucleus	35.14	5.83
GSMUA_Achr8P05740_001	Banana	nucleus	55.86	5.78
KRH14801	Soybean	nucleus	34.23	5.63
KRH27856	Soybean	nucleus	53.15	5.25
Os05t0571000-01	Rice	cytosol	53.15	5.16
EES19971	Sorghum	cytosol	52.25	5.14
KRH77627	Soybean	nucleus	52.25	5.14
KRH55275	Soybean	cytosol	36.94	5.1
KRH26155	Soybean	cytosol	36.04	5.08
Zm00001d009617_P017	Maize	mitochondrion	52.25	5.06
Zm00001d039072_P005	Maize	cytosol	50.45	4.99
KRH22086	Soybean	plastid	38.74	4.75
KRH27246	Soybean	plastid	38.74	4.74
TraesCS1D01G417600.1	Wheat	cytosol	52.25	4.56
HORVU1Hr1G090080.3	Barley	cytosol	52.25	4.34
KRH55271	Soybean	cytosol	1.8	1.57

Protein Annotations

EMBL:ACUP02007378	EnsemblPlants:KRH25904	EnsemblPlantsGene:GLYMA_12G137600	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	PANTHER:PTHR44218	PANTHER:PTHR44218:SF3	ProteinID:KRH25904
ProteinID:KRH25904.1	UniParc:UPI000295C1AC	UniProt:K7LUN7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr12:+:16399198..16400012

Molecular Weight (calculated)

12347.9 Da

IEP (calculated)

8.498

GRAVY (calculated)

-0.150

Length

111 amino acids

Sequence
(BLAST)

001: MVHVLGRKSS PEMPRRIQSS VGCLGSFFEG LCKFAHYSKF EECGRLRNRD LLSSANVMCV LSFDRDEDHI AAGGVSKKIK IFDLNAISSD SVDIQYPVVE
101: MSNKSKLSCV K

Best Arabidopsis Sequence Match ( AT2G46340.1 )
(BLAST)

0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV

Arabidopsis Description

SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.