Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80009 | Canola | nucleus | 91.96 | 91.31 |
| Bra004545.1-P | Field mustard | nucleus | 91.76 | 89.31 |
| AT2G46340.2 | Thale cress | nucleus | 85.15 | 81.34 |
| CDX83371 | Canola | nucleus | 73.14 | 80.52 |
| CDX95691 | Canola | nucleus | 73.25 | 78.77 |
| KRH25904 | Soybean | mitochondrion | 6.82 | 60.36 |
| GSMUA_Achr11P... | Banana | cytosol | 38.05 | 45.39 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 47.41 | 43.47 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 43.64 | 42.06 |
| PGSC0003DMT400049874 | Potato | nucleus | 42.73 | 41.42 |
| CDY19171 | Canola | cytosol | 10.48 | 40.87 |
| KRH06512 | Soybean | nucleus | 42.52 | 40.86 |
| Solyc10g011690.2.1 | Tomato | nucleus | 42.12 | 40.63 |
| CDY50512 | Canola | nucleus | 30.32 | 40.38 |
| CDY40851 | Canola | nucleus | 40.28 | 40.28 |
| CDX86817 | Canola | nucleus | 39.67 | 40.25 |
| KRH47949 | Soybean | nucleus | 42.32 | 40.19 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 41.1 | 37.69 |
| Os05t0571000-01 | Rice | cytosol | 43.44 | 37.33 |
| EES19971 | Sorghum | cytosol | 41.71 | 36.35 |
| CDX98548 | Canola | nucleus, plastid | 29.3 | 36.27 |
| CDX97654 | Canola | nucleus, plastid | 29.3 | 36.23 |
| CDY20122 | Canola | nucleus | 28.89 | 36.04 |
| Zm00001d009617_P017 | Maize | mitochondrion | 42.01 | 36.04 |
| Zm00001d039072_P005 | Maize | cytosol | 41.1 | 36.01 |
| CDX79494 | Canola | cytosol | 3.76 | 35.92 |
| CDY21834 | Canola | nucleus, plastid | 28.89 | 35.9 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 43.13 | 33.33 |
| CDX87159 | Canola | cytosol | 12.31 | 32.7 |
| CDY16865 | Canola | nucleus | 12.31 | 32.61 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 42.73 | 31.46 |
| CDY32590 | Canola | cytosol | 11.29 | 31.36 |
| CDY38909 | Canola | cytosol | 11.19 | 31.25 |
| CDY12145 | Canola | nucleus | 21.06 | 30.62 |
| CDY52540 | Canola | nucleus | 21.06 | 30.58 |
| CDY25880 | Canola | nucleus | 13.43 | 28.63 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | GO:A0A078HU67 | UniProt:A0A078HU67 |
| EnsemblPlants:CDY42035 | ProteinID:CDY42035 | ProteinID:CDY42035.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00074049001 | InterPro:IPR000719 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50011 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF3 | InterPro:Prot_kinase_dom | SMART:SM00320 | SUPFAM:SSF50978 |
| SUPFAM:SSF56112 | UniParc:UPI0004EDF76D | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC04g01130DBnaC04g01130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU67]
Coordinates
chrLK032512:-:201427..206137
Molecular Weight (calculated)
109001.0 Da
IEP (calculated)
7.738
GRAVY (calculated)
-0.516
Length
983 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAMERVGEE TVGSNNVQLK GRVDDVPTVN ESEPGSSAHN VVDIDKAPEE AKISVEELTY NRAVQGSNNN NNNHMESSRA GKFEHLYRLG SSAFRGGAGD
101: GGGGGGDVDS QPRDMDQMLS RIRQQLAGAP SERQNLMKPF VNKRSDQNLE AFSERLRAAG GENSVGPAWI SDGVQLKTPL SSSSFSQLIL KRAMKGKGVV
201: GKNQEAPPPE SPIAHDPLAV KPIPKGNGVV SHGEGNHTNS SSCGISLREF IRSSYGKREK RHSLSLFRQL VELIGSAHSQ GLFLLELRPS LFALVPSKKL
301: RYNGTFGKSS IESDGDEDLN RKRHVVQESS LVGRDLKKRR MDLNAPGNQL QATSSGRPLK RKSPLIDLNV VDVRNPDSCE LQQQSYMKNL GVPSVTRKQS
401: MSTWLEEQWY TCPEEINGED IGEKSNIYSL GVLLFELLCH CESSEMHAAM MADLRHRILP PAFLSRYPKE AGFCLWLLHP EPSSRPTARE ILKSELIYVE
501: DSAKSTAAAE EMSELLLHFL SSLEKQKKKN ASKLLQDIQT LEDDIKEAER RYSSKASLVR SREAIESTPG ALFVPTANTD RLMSNIRQLE DAYFIMRSQM
601: KLSDSTASAR SDKSLLKDKD KWSENQNKDQ DARTKGKSSD QLEVFFEGLC KFARYSKFET CGTIRSGDLL NSASVVCSLS FDPDEEHIAA AGISKKIKIF
701: DFNAFMNESV GVHYPLVEMV NKSKLSCVCW NSYIKNYLAS TDYDGVVQIW DAGTGQGFSQ YTEHQKRAWS VDFSPSDPTK FVSGSDDCSV KLWSKRSLGT
801: IWSPANVCCV QFSSYSNHLL AFGSADYKVY CYDLRYVKTP WCTLAGHEKA VSYVKFMDSE TIVTASTDNS LKLWNLNKTN SSGLSPGACS MTYKGHTNQK
901: NFVGLSVLDG YIACGSETNE VYSYYRSLPM PMTSYKFGSV DPVSGNEYFD DNGQFVSSVC WRKKSNMLVA ANSTGNMKLL KLV
101: GGGGGGDVDS QPRDMDQMLS RIRQQLAGAP SERQNLMKPF VNKRSDQNLE AFSERLRAAG GENSVGPAWI SDGVQLKTPL SSSSFSQLIL KRAMKGKGVV
201: GKNQEAPPPE SPIAHDPLAV KPIPKGNGVV SHGEGNHTNS SSCGISLREF IRSSYGKREK RHSLSLFRQL VELIGSAHSQ GLFLLELRPS LFALVPSKKL
301: RYNGTFGKSS IESDGDEDLN RKRHVVQESS LVGRDLKKRR MDLNAPGNQL QATSSGRPLK RKSPLIDLNV VDVRNPDSCE LQQQSYMKNL GVPSVTRKQS
401: MSTWLEEQWY TCPEEINGED IGEKSNIYSL GVLLFELLCH CESSEMHAAM MADLRHRILP PAFLSRYPKE AGFCLWLLHP EPSSRPTARE ILKSELIYVE
501: DSAKSTAAAE EMSELLLHFL SSLEKQKKKN ASKLLQDIQT LEDDIKEAER RYSSKASLVR SREAIESTPG ALFVPTANTD RLMSNIRQLE DAYFIMRSQM
601: KLSDSTASAR SDKSLLKDKD KWSENQNKDQ DARTKGKSSD QLEVFFEGLC KFARYSKFET CGTIRSGDLL NSASVVCSLS FDPDEEHIAA AGISKKIKIF
701: DFNAFMNESV GVHYPLVEMV NKSKLSCVCW NSYIKNYLAS TDYDGVVQIW DAGTGQGFSQ YTEHQKRAWS VDFSPSDPTK FVSGSDDCSV KLWSKRSLGT
801: IWSPANVCCV QFSSYSNHLL AFGSADYKVY CYDLRYVKTP WCTLAGHEKA VSYVKFMDSE TIVTASTDNS LKLWNLNKTN SSGLSPGACS MTYKGHTNQK
901: NFVGLSVLDG YIACGSETNE VYSYYRSLPM PMTSYKFGSV DPVSGNEYFD DNGQFVSSVC WRKKSNMLVA ANSTGNMKLL KLV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.