Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | CDX69493 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | CDX85529 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | CDX90969 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | CDY26470 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86817 | Canola | nucleus | 95.12 | 96.49 |
| Bra035252.1-P | Field mustard | nucleus | 95.93 | 96.22 |
| AT4G11110.1 | Thale cress | nucleus | 83.32 | 79.05 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 18.31 | 74.69 |
| KRH60015 | Soybean | plasma membrane | 42.83 | 50.18 |
| KRH41290 | Soybean | nucleus | 48.52 | 46.13 |
| CDY19171 | Canola | cytosol | 11.8 | 46.03 |
| GSMUA_Achr11P... | Banana | cytosol | 38.25 | 45.63 |
| KRH27856 | Soybean | nucleus | 49.64 | 43.45 |
| KRH77627 | Soybean | nucleus | 49.14 | 42.78 |
| CDX83371 | Canola | nucleus | 37.84 | 41.66 |
| Solyc08g081990.2.1 | Tomato | cytosol | 44.05 | 41.16 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 42.32 | 40.78 |
| CDX95691 | Canola | nucleus | 37.64 | 40.48 |
| CDY42035 | Canola | nucleus | 40.28 | 40.28 |
| CDY50512 | Canola | nucleus | 30.11 | 40.11 |
| CDX80009 | Canola | nucleus | 40.39 | 40.1 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 32.15 | 38.21 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 41.61 | 38.15 |
| Os05t0571000-01 | Rice | cytosol | 43.13 | 37.06 |
| CDX79494 | Canola | cytosol | 3.87 | 36.89 |
| EES19971 | Sorghum | cytosol | 42.22 | 36.79 |
| CDX98548 | Canola | nucleus, plastid | 29.7 | 36.78 |
| CDY20122 | Canola | nucleus | 29.4 | 36.68 |
| CDY21834 | Canola | nucleus, plastid | 29.4 | 36.54 |
| Zm00001d039072_P005 | Maize | cytosol | 41.61 | 36.45 |
| CDX97654 | Canola | nucleus, plastid | 29.4 | 36.35 |
| Zm00001d009617_P017 | Maize | mitochondrion | 41.71 | 35.78 |
| PGSC0003DMT400031699 | Potato | cytosol | 30.42 | 34.05 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 43.03 | 33.25 |
| CDY16865 | Canola | nucleus | 12.41 | 32.88 |
| CDX87159 | Canola | cytosol | 12.31 | 32.7 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 43.54 | 32.06 |
| CDY32590 | Canola | cytosol | 11.5 | 31.92 |
| CDY38909 | Canola | cytosol | 11.19 | 31.25 |
| CDY25880 | Canola | nucleus | 14.45 | 30.8 |
| CDY12145 | Canola | nucleus | 20.65 | 30.03 |
| CDY52540 | Canola | nucleus | 20.65 | 29.99 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | GO:A0A078HSY4 | UniProt:A0A078HSY4 |
| EnsemblPlants:CDY40851 | ProteinID:CDY40851 | ProteinID:CDY40851.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00071840001 | InterPro:IPR000719 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50011 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 |
| PANTHER:PTHR44218:SF2 | InterPro:Prot_kinase_dom | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI0004EDE1DC |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
BnaC09g26140DBnaC09g26140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSY4]
Coordinates
chrLK032482:-:10999..16031
Molecular Weight (calculated)
108410.0 Da
IEP (calculated)
5.791
GRAVY (calculated)
-0.462
Length
983 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDESSVSSS INEAEAAHIQ FKNGQQSLKP DEIQETKQVQ AEVQRDDPGS PDSSFGVIAD FLDGKNVNET ENEPCSADDV VEELTVKTCE GSSMAIVGSS
101: SSGARLEINR TQFLPSSSSM DKREGDKVIT SILRNAGKTS TGDVERNPVP VDALSHGGIK TKMLSQSGFS QFFVKKTLKG KGVTFRGPPL NRSKASNVDQ
201: QSVASPSVIS NDTPAKVSGS TPLAVEACDV LPLKGGNPSS CTSNPSDSGC GGEGLSLRDW LKSERQEVNK AECFRIFRQI VEHVDDSHSQ GVVLSDPRPS
301: FFKILKENEV KYVGSGFHRE SSDSNLNKNT LSQPEKPLVR RRLGDTGFAS SPGVPAKKHK SSGPSSRQWP MFQRAGGNLN IQTENDVSAT QELRLRSSHP
401: QCSPSARSFT SMSEQLEEKW YASPEELRGE TRSVSSNIYS LGILLFELLS QFQSERAREA VMSDIRHRIL PPKFLSENPK EAGFCLWDIL QSEVVNGIPD
501: LYAEGLSLAI EQEDTESELL QHFLVLSQEQ MQKHAGKLMG EIVSLEADIE EIVKRRCAIS PLSVGEASGS SLASSVPEKR LVTNIKQLET AYFGARIDVH
601: LPEARYRLRP DRDLLRNRDE NVISEQENSE TWSSDDRVGA FFDGLCKYAR YSKFETRGVL RTGELNNTSN VICSLGFDRD EDYFATAGVS KKIKIFEFNS
701: LFNESVDIHY PAVEMSNRSK LSGVCWNNYI RNYLASSDYD GIIKLWDVTT GQAISHFIEH EKRAWSVDFS EACPTKLASG SDDCSVKLTW GYSVRNCLGT
801: IRNIANVCCV QFSPQSSHLL AFGSSDFRTY CYDTRNLRTP WCILSGHNKA VSYAKFLDSE TLVTASTDNT LKLWDLKKTT HGGLSTNACS LTFGGHTNEK
901: NFVGLSTADG YIACGSETNE VYAYHRSLPM PITAYKFGSI DPISGKEIEE DNNLFVSSVC WRKRSNMVVS ASSNGSIKVL QLV
101: SSGARLEINR TQFLPSSSSM DKREGDKVIT SILRNAGKTS TGDVERNPVP VDALSHGGIK TKMLSQSGFS QFFVKKTLKG KGVTFRGPPL NRSKASNVDQ
201: QSVASPSVIS NDTPAKVSGS TPLAVEACDV LPLKGGNPSS CTSNPSDSGC GGEGLSLRDW LKSERQEVNK AECFRIFRQI VEHVDDSHSQ GVVLSDPRPS
301: FFKILKENEV KYVGSGFHRE SSDSNLNKNT LSQPEKPLVR RRLGDTGFAS SPGVPAKKHK SSGPSSRQWP MFQRAGGNLN IQTENDVSAT QELRLRSSHP
401: QCSPSARSFT SMSEQLEEKW YASPEELRGE TRSVSSNIYS LGILLFELLS QFQSERAREA VMSDIRHRIL PPKFLSENPK EAGFCLWDIL QSEVVNGIPD
501: LYAEGLSLAI EQEDTESELL QHFLVLSQEQ MQKHAGKLMG EIVSLEADIE EIVKRRCAIS PLSVGEASGS SLASSVPEKR LVTNIKQLET AYFGARIDVH
601: LPEARYRLRP DRDLLRNRDE NVISEQENSE TWSSDDRVGA FFDGLCKYAR YSKFETRGVL RTGELNNTSN VICSLGFDRD EDYFATAGVS KKIKIFEFNS
701: LFNESVDIHY PAVEMSNRSK LSGVCWNNYI RNYLASSDYD GIIKLWDVTT GQAISHFIEH EKRAWSVDFS EACPTKLASG SDDCSVKLTW GYSVRNCLGT
801: IRNIANVCCV QFSPQSSHLL AFGSSDFRTY CYDTRNLRTP WCILSGHNKA VSYAKFLDSE TLVTASTDNT LKLWDLKKTT HGGLSTNACS LTFGGHTNEK
901: NFVGLSTADG YIACGSETNE VYAYHRSLPM PITAYKFGSI DPISGKEIEE DNNLFVSSVC WRKRSNMVVS ASSNGSIKVL QLV
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Arabidopsis Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.