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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86817 Canola nucleus 78.57 84.0
Bra035252.1-P Field mustard nucleus 79.15 83.67
CDY40851 Canola nucleus 79.05 83.32
VIT_02s0025g01110.t01 Wine grape cytosol, plastid 17.76 76.35
KRH60015 Soybean plasma membrane 42.18 52.09
KRH41290 Soybean nucleus 48.07 48.16
GSMUA_Achr11P... Banana cytosol 37.93 47.69
KRH27856 Soybean nucleus 48.94 45.15
KRH77627 Soybean nucleus 48.26 44.29
Solyc08g081990.2.1 Tomato cytosol 44.88 44.2
GSMUA_Achr1P28310_001 Banana nucleus 41.51 42.16
VIT_02s0025g01130.t01 Wine grape cytosol 32.34 40.51
AT2G46340.2 Thale cress nucleus 39.29 39.55
GSMUA_Achr8P05740_001 Banana nucleus 40.93 39.55
AT1G53090.1 Thale cress nucleus 29.63 38.66
Os05t0571000-01 Rice cytosol 42.28 38.29
Zm00001d039072_P005 Maize cytosol 41.22 38.06
EES19971 Sorghum cytosol 41.22 37.85
PGSC0003DMT400031699 Potato cytosol 31.85 37.59
Zm00001d009617_P017 Maize mitochondrion 40.73 36.82
AT3G15354.3 Thale cress nucleus 28.47 34.91
TraesCS1D01G417600.1 Wheat cytosol 41.99 34.2
AT5G23730.1 Thale cress nucleus 11.78 33.15
HORVU1Hr1G090080.3 Barley cytosol 41.8 32.43
AT2G32950.1 Thale cress nucleus 19.79 30.37
AT5G52250.1 Thale cress cytosol, plastid 10.62 28.57
Protein Annotations
MapMan:18.4.16MapMan:19.2.2.8.3.4.2Gene3D:2.130.10.10MapMan:26.1.1.3.3.2EntrezGene:826712ProteinID:AAC35546.1
ProteinID:AAC35547.1ProteinID:AEE82974.1EMBL:AK229182ArrayExpress:AT4G11110EnsemblPlantsGene:AT4G11110RefSeq:AT4G11110
TAIR:AT4G11110RefSeq:AT4G11110-TAIR-GEnsemblPlants:AT4G11110.1TAIR:AT4G11110.1Unigene:At.46392ProteinID:CAB43046.1
ProteinID:CAB81212.1ncoils:CoilInterPro:G-protein_beta_WD-40_repGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009585GO:GO:0009605GO:GO:0009628GO:GO:0009987
GO:GO:0010017GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0080008InterPro:IPR000719
InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986InterPro:Kinase-like_dom_sfRefSeq:NP_192849.4PFAM:PF00400
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025195PO:PO:0025281PRINTS:PR00320ScanProsite:PS00678PFscan:PS50011PFscan:PS50082
PFscan:PS50294PANTHER:PTHR44218PANTHER:PTHR44218:SF2InterPro:Prot_kinase_domUniProt:Q9T014SMART:SM00320
Symbol:SPA2SUPFAM:SSF50978SUPFAM:SSF56112UniParc:UPI0001505809InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfSEG:seg::
Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
Coordinates
chr4:+:6771605..6777225
Molecular Weight (calculated)
115012.0 Da
IEP (calculated)
5.984
GRAVY (calculated)
-0.463
Length
1036 amino acids
Sequence
(BLAST)
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.