Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | KRG93763 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH01455 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH18308 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | KRH45169 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60015 | Soybean | plasma membrane | 72.92 | 89.87 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 18.96 | 81.33 |
| KRH27856 | Soybean | nucleus | 69.25 | 63.76 |
| KRH77627 | Soybean | nucleus | 68.96 | 63.15 |
| KRH25904 | Soybean | mitochondrion | 5.9 | 54.95 |
| GSMUA_Achr11P... | Banana | cytosol | 39.27 | 49.27 |
| Solyc08g081990.2.1 | Tomato | cytosol | 49.81 | 48.95 |
| CDX86817 | Canola | nucleus | 45.65 | 48.71 |
| CDY40851 | Canola | nucleus | 46.13 | 48.52 |
| Bra035252.1-P | Field mustard | nucleus | 45.74 | 48.27 |
| AT4G11110.1 | Thale cress | nucleus | 48.16 | 48.07 |
| KRH55271 | Soybean | cytosol | 5.9 | 48.03 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 36.85 | 46.07 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 44.29 | 44.9 |
| PGSC0003DMT400031699 | Potato | cytosol | 36.07 | 42.48 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 42.36 | 40.86 |
| EES19971 | Sorghum | cytosol | 44.29 | 40.6 |
| Zm00001d039072_P005 | Maize | cytosol | 43.62 | 40.2 |
| KRH06512 | Soybean | nucleus | 39.17 | 39.59 |
| Zm00001d009617_P017 | Maize | mitochondrion | 43.81 | 39.53 |
| Os05t0571000-01 | Rice | cytosol | 43.33 | 39.16 |
| KRH47949 | Soybean | nucleus | 39.07 | 39.03 |
| KRH26155 | Soybean | cytosol | 27.56 | 36.17 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 44.39 | 36.08 |
| KRH55275 | Soybean | cytosol | 27.85 | 35.82 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 43.91 | 34.01 |
| KRH27246 | Soybean | plastid | 29.21 | 33.3 |
| KRH22086 | Soybean | plastid | 29.11 | 33.22 |
| KRH73341 | Soybean | nucleus | 20.21 | 31.24 |
| KRH14801 | Soybean | nucleus | 20.21 | 30.96 |
Protein Annotations
| EntrezGene:100776980 | MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | EMBL:ACUP02004759 |
| ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | EnsemblPlantsGene:GLYMA_08G021200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K7L4I1 | EnsemblPlants:KRH41290 | ProteinID:KRH41290 |
| ProteinID:KRH41290.1 | ProteinID:KRH41291.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | SMART:SM00320 | SUPFAM:SSF50978 |
| SUPFAM:SSF56112 | UniParc:UPI00023C64BC | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:1709658..1717636
Molecular Weight (calculated)
115617.0 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.447
Length
1034 amino acids
Sequence
(BLAST)
(BLAST)
0001: MISFNSMDEE LEVGEGVQHQ TKDDGFSLNP EFPKILKPQE IYTSYSHISQ DKNVVEAREH LHPSLFSDGA GAMVEELTVK SYNGSRLHIG TLNNPGPLHN
0101: SRSQWRHIYQ PVGDSGMGSD CIIARKSVEA TSSAWEDIGS TSFRDMLDRK PVNDEQGHVM QHLSTDVHTA EHKEDEGHAH EGIQTKVIHK SGFAEYSGRS
0201: TLKGKGVVCK GPSSNGLYIE SRDQNPIKSG IDTQMDSNAL PSSGLKTAKS PHNATGPGSG GSDTDGVTLR EWLKSRHHKR SKTDHLSIFR KIVDLVDGSH
0301: FEGVAMRNLY PSYIKLLPSN QVMYLGLPAQ KQTLDSVANS EVLQLDNSFI RKRLSETVIS PSLNLQLKKQ KFNENARVAG DWSQCPPRTD LYLQIANDIK
0401: VNAVGSQDYY NEYKEDIQFS KHNIGRMSRI PHISSAGQLQ LTSLNEGLED KWYASPEGGC TTSSNIYCLG VLLFELLNHF DSERAHIAAM SNLRHRILPS
0501: VFLSEYPMEA GFCLWMMHPE PSSRPTLREI LQSEVINGIH EVYCEELSSS LNQDDAESEL LLHFLISLKE QKHMDANKLA EEIRCLESDV KEVERRHDLR
0601: KSLLPSSLQN DSSLQIENVS LKESIISNAN ELRLMKIIPR LESAYFSMRS KIKLPETDTA THPDKDILIN HDNWCGAQKD MEQHKATDAL GAFFDSLCKY
0701: ARYSKFEVRG ILRNTDFNNP ANVICSLSFD RDEDYFAAAG ISKKIKIFEF NALFNDSIDI HYPVVEMSNR SRLSCVCWNN YIQNYLASTD YDGAVKLWDA
0801: NTGQGFSRFT EHEKRAWSVD FSLLCPTKFA SGSDDCSVKL WNINEKNSLA TIRNVANVCC VQFSTHSSHL LAFGSADYSA YCYDLRNLRN PWCVLAGHRK
0901: AVSYVKFLDS ETLVSASTDN MLKIWDLNKT SPVGPSTSAC SLTLSGHTNE KNFVGLSVAD GYIACGSETN EVYVYHKSLP MPVTSHRFGS IDPISGEETD
1001: DDNGLFVSSV CWRGKSDMVV AANSSGCIKV LQMV
0101: SRSQWRHIYQ PVGDSGMGSD CIIARKSVEA TSSAWEDIGS TSFRDMLDRK PVNDEQGHVM QHLSTDVHTA EHKEDEGHAH EGIQTKVIHK SGFAEYSGRS
0201: TLKGKGVVCK GPSSNGLYIE SRDQNPIKSG IDTQMDSNAL PSSGLKTAKS PHNATGPGSG GSDTDGVTLR EWLKSRHHKR SKTDHLSIFR KIVDLVDGSH
0301: FEGVAMRNLY PSYIKLLPSN QVMYLGLPAQ KQTLDSVANS EVLQLDNSFI RKRLSETVIS PSLNLQLKKQ KFNENARVAG DWSQCPPRTD LYLQIANDIK
0401: VNAVGSQDYY NEYKEDIQFS KHNIGRMSRI PHISSAGQLQ LTSLNEGLED KWYASPEGGC TTSSNIYCLG VLLFELLNHF DSERAHIAAM SNLRHRILPS
0501: VFLSEYPMEA GFCLWMMHPE PSSRPTLREI LQSEVINGIH EVYCEELSSS LNQDDAESEL LLHFLISLKE QKHMDANKLA EEIRCLESDV KEVERRHDLR
0601: KSLLPSSLQN DSSLQIENVS LKESIISNAN ELRLMKIIPR LESAYFSMRS KIKLPETDTA THPDKDILIN HDNWCGAQKD MEQHKATDAL GAFFDSLCKY
0701: ARYSKFEVRG ILRNTDFNNP ANVICSLSFD RDEDYFAAAG ISKKIKIFEF NALFNDSIDI HYPVVEMSNR SRLSCVCWNN YIQNYLASTD YDGAVKLWDA
0801: NTGQGFSRFT EHEKRAWSVD FSLLCPTKFA SGSDDCSVKL WNINEKNSLA TIRNVANVCC VQFSTHSSHL LAFGSADYSA YCYDLRNLRN PWCVLAGHRK
0901: AVSYVKFLDS ETLVSASTDN MLKIWDLNKT SPVGPSTSAC SLTLSGHTNE KNFVGLSVAD GYIACGSETN EVYVYHKSLP MPVTSHRFGS IDPISGEETD
1001: DDNGLFVSSV CWRGKSDMVV AANSSGCIKV LQMV
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Arabidopsis Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.