Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P28130_001 | |
| GSMUA_Achr4P18680_001 | |
| GSMUA_Achr9P22690_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | GSMUA_Achr3P28130_001 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | GSMUA_Achr4P18680_001 | AT5G15850.1 | 16854975 |
| AT4G11110.1 | GSMUA_Achr9P22690_001 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 17.84 | 75.52 |
| KRH25904 | Soybean | mitochondrion | 5.88 | 54.05 |
| GSMUA_Achr11P... | Banana | cytosol | 42.55 | 52.67 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 54.61 | 51.96 |
| GSMUA_Achr1P13690_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 3.82 | 50.65 |
| KRH60015 | Soybean | plasma membrane | 40.29 | 48.99 |
| EES19971 | Sorghum | cytosol | 53.14 | 48.05 |
| Os05t0571000-01 | Rice | cytosol | 53.53 | 47.73 |
| Zm00001d039072_P005 | Maize | cytosol | 51.47 | 46.79 |
| Zm00001d009617_P017 | Maize | mitochondrion | 51.57 | 45.9 |
| CDX83371 | Canola | nucleus | 39.02 | 44.57 |
| KRH41290 | Soybean | nucleus | 44.9 | 44.29 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 46.37 | 44.12 |
| CDX95691 | Canola | nucleus | 39.12 | 43.65 |
| CDY42035 | Canola | nucleus | 42.06 | 43.64 |
| AT2G46340.2 | Thale cress | nucleus | 44.02 | 43.63 |
| Solyc08g081990.2.1 | Tomato | cytosol | 44.41 | 43.06 |
| CDX80009 | Canola | nucleus | 41.76 | 43.03 |
| CDX86817 | Canola | nucleus | 40.59 | 42.72 |
| Bra000420.1-P | Field mustard | nucleus | 39.8 | 42.6 |
| Bra004545.1-P | Field mustard | nucleus | 42.16 | 42.57 |
| CDY40851 | Canola | nucleus | 40.78 | 42.32 |
| PGSC0003DMT400049874 | Potato | nucleus | 42.06 | 42.31 |
| KRH27856 | Soybean | nucleus | 46.47 | 42.21 |
| Bra035252.1-P | Field mustard | nucleus | 40.2 | 41.84 |
| KRH77627 | Soybean | nucleus | 46.27 | 41.81 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 51.96 | 41.67 |
| Solyc10g011690.2.1 | Tomato | nucleus | 41.57 | 41.61 |
| AT4G11110.1 | Thale cress | nucleus | 42.16 | 41.51 |
| KRH06512 | Soybean | nucleus | 41.08 | 40.96 |
| KRH47949 | Soybean | nucleus | 41.08 | 40.48 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 51.57 | 39.4 |
| GSMUA_Achr3P31750_001 | Banana | nucleus | 29.41 | 39.06 |
| GSMUA_Achr1P13700_001 | Banana | nucleus | 27.06 | 35.84 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 28.92 | 35.67 |
| PGSC0003DMT400031699 | Potato | cytosol | 30.49 | 35.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.59 | 32.86 |
| GSMUA_Achr3P20130_001 | Banana | nucleus | 20.59 | 31.07 |
| GSMUA_Achr9P23670_001 | Banana | cytosol | 6.27 | 24.62 |
| GSMUA_Achr4P11950_001 | Banana | mitochondrion | 6.57 | 22.48 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr1G28310_001 | EnsemblPlants:GSMUA_Achr1P28310_001 | EnsemblPlants:GSMUA_Achr1T28310_001 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf | UniProt:M0S3T8 | PFAM:PF00400 |
| PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 |
| SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI0002966AAD | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
Putative Protein SUPPRESSOR OF PHYA-105 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G28310_001]
Coordinates
chr1:-:27491930..27506575
Molecular Weight (calculated)
114247.0 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.477
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGPAEVNET FESSVDAPHI KKTENDQPPE QPSPDNAAET HAPLVSQDAE WAEHFTWLQT PEMFLERMAG GSLNCDPHAH SGPEPHSSDA HSLSNQGEMV
0101: EELTLNNYKN PNLSLGSSTS SGEKTSVRMG LWQNFTRHAG KSRDTATRKS LSMGHNDDVD NRFLPPSGTQ RPSLATQSEP KDSRFPEHVS KIDKHIIPST
0201: TTTKSPAAIR TKVLSASGFQ QYLVKTTLKG KGVVYNHQEN RDEPGVVISR QNIEKPNANL NVTFKSSHSP SCKVDSISFK HLGTSNPYSE GITLREWLKP
0301: KRHKINKAER MHIFEQILDF VDICHSQLLV LQYLRPSYFI KYPSNQVKYI GSFETHEVSV LKLQKFRDHN SDSNEHHTYP FTGGSVGDDQ GEEKEADSFR
0401: AGTTGSAFRA VKLEKWHKGH NVNCSPGISS SISQQSISEL VKLEEKWYAS PEEINDYVCS SASNIYSLGV FLFELLCCFE TWEVQSAAML DLQHRILPRT
0501: FLSESPKEAG FCLWLLHPDP SSRPMSRDII QSDLLSERRN FPSLDNSSAL IEEEDAEADL LLHFLLSLKE QKKMQASKLE AQLSYLKADI EEAERRLISK
0601: TQLFSDDRAI STLCKSNKYE ERLMRNIDQL ESAYFSRCSR IGTPEFIAAM RSDYDVLKIR DRCSQLLNDA DEATDHLGTF FDGLCKFAQY SKFEVCGSLK
0701: NLDIVNSANV ICSLSFDRDE DYFAAAGVSK KIKIFEFGAL LNESVDVHYP LIEMTSGSKL SCVCWNDYIK NYLASTDYEG IVQLWDASTG QGFTKFAEHK
0801: RRAWSVNFSV LDPTMLASGS DDCTVKIWSI NEKGSLDTIR NVANVCCVQL SHSSHLLAFG SADYKIYCYD LRNTRIPWCT LSGHGKAISY VKFLDSETIV
0901: SASTDNTLKL WDLKRTNPSG LSTNACSLTL SGHTNEKNFV GLSVCDGYIV CGSETNEVYA YYKTFPMPMT SHKFGSIDPN TGQETSDDDG QFVSSVCWRG
1001: KSDMVIAANS TGRIKVLQLV
0101: EELTLNNYKN PNLSLGSSTS SGEKTSVRMG LWQNFTRHAG KSRDTATRKS LSMGHNDDVD NRFLPPSGTQ RPSLATQSEP KDSRFPEHVS KIDKHIIPST
0201: TTTKSPAAIR TKVLSASGFQ QYLVKTTLKG KGVVYNHQEN RDEPGVVISR QNIEKPNANL NVTFKSSHSP SCKVDSISFK HLGTSNPYSE GITLREWLKP
0301: KRHKINKAER MHIFEQILDF VDICHSQLLV LQYLRPSYFI KYPSNQVKYI GSFETHEVSV LKLQKFRDHN SDSNEHHTYP FTGGSVGDDQ GEEKEADSFR
0401: AGTTGSAFRA VKLEKWHKGH NVNCSPGISS SISQQSISEL VKLEEKWYAS PEEINDYVCS SASNIYSLGV FLFELLCCFE TWEVQSAAML DLQHRILPRT
0501: FLSESPKEAG FCLWLLHPDP SSRPMSRDII QSDLLSERRN FPSLDNSSAL IEEEDAEADL LLHFLLSLKE QKKMQASKLE AQLSYLKADI EEAERRLISK
0601: TQLFSDDRAI STLCKSNKYE ERLMRNIDQL ESAYFSRCSR IGTPEFIAAM RSDYDVLKIR DRCSQLLNDA DEATDHLGTF FDGLCKFAQY SKFEVCGSLK
0701: NLDIVNSANV ICSLSFDRDE DYFAAAGVSK KIKIFEFGAL LNESVDVHYP LIEMTSGSKL SCVCWNDYIK NYLASTDYEG IVQLWDASTG QGFTKFAEHK
0801: RRAWSVNFSV LDPTMLASGS DDCTVKIWSI NEKGSLDTIR NVANVCCVQL SHSSHLLAFG SADYKIYCYD LRNTRIPWCT LSGHGKAISY VKFLDSETIV
0901: SASTDNTLKL WDLKRTNPSG LSTNACSLTL SGHTNEKNFV GLSVCDGYIV CGSETNEVYA YYKTFPMPMT SHKFGSIDPN TGQETSDDDG QFVSSVCWRG
1001: KSDMVIAANS TGRIKVLQLV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.