Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_14s0083g00640.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | VIT_14s0083g00640.t01 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031699 | Potato | cytosol | 46.31 | 43.62 |
| KRH27856 | Soybean | nucleus | 50.67 | 37.31 |
| Solyc08g081990.2.1 | Tomato | cytosol | 46.92 | 36.88 |
| KRH41290 | Soybean | nucleus | 46.07 | 36.85 |
| KRH77627 | Soybean | nucleus | 50.06 | 36.67 |
| KRH60015 | Soybean | plasma membrane | 37.0 | 36.47 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 43.65 | 33.68 |
| CDX86817 | Canola | nucleus | 38.94 | 33.23 |
| Bra035252.1-P | Field mustard | nucleus | 38.94 | 32.86 |
| AT4G11110.1 | Thale cress | nucleus | 40.51 | 32.34 |
| CDY40851 | Canola | nucleus | 38.21 | 32.15 |
| GSMUA_Achr11P... | Banana | cytosol | 28.9 | 29.0 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 35.67 | 28.92 |
| Zm00001d039072_P005 | Maize | cytosol | 36.28 | 26.74 |
| EES19971 | Sorghum | cytosol | 36.03 | 26.42 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 33.86 | 26.12 |
| Zm00001d009617_P017 | Maize | mitochondrion | 35.91 | 25.92 |
| Os05t0571000-01 | Rice | cytosol | 35.19 | 25.44 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 34.95 | 22.72 |
| VIT_19s0014g02660.t01 | Wine grape | nucleus | 23.94 | 21.71 |
| VIT_12s0028g03570.t01 | Wine grape | cytosol | 23.1 | 21.39 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 34.46 | 21.35 |
| VIT_10s0523g00030.t01 | Wine grape | nucleus | 11.73 | 16.11 |
| VIT_12s0059g01420.t01 | Wine grape | nucleus | 11.85 | 14.5 |
| VIT_16s0050g00020.t01 | Wine grape | cytosol | 3.99 | 4.29 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 0.85 | 2.9 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.16 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | ProteinID:CCB58235 | ProteinID:CCB58235.1 |
| ncoils:Coil | UniProt:F6HUR9 | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015943 | InterPro:Kinase-like_dom_sf | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | SUPFAM:SSF50978 | SUPFAM:SSF56112 |
| UniParc:UPI0002108EA1 | ArrayExpress:VIT_02s0025g01130 | EnsemblPlantsGene:VIT_02s0025g01130 | EnsemblPlants:VIT_02s0025g01130.t01 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:1079914..1092313
Molecular Weight (calculated)
91540.7 Da
IEP (calculated)
6.145
GRAVY (calculated)
-0.461
Length
827 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDEVTTIDV AEGSHLQRKE SEYLLKPDSS SMLNSREMVI PGEGDYPESS PQEFTGILEG KNVNKTVSSL AAAEHTCSGH LPVDDAGIMI EELTLRNYNG
101: ANLAVVGPSN NRDRMQIRQN QWQHIHLLAG GQGTGSSVRD SVRRDNGQPM SSAWEDVGYS SFPEFLAQKQ SSHDHNEVRE QVTNCENRAV SGDTLSPGGI
201: RTKILSKSGF SEFFIKNSLK GKGVICRGPA RDGFGVEIRD SNITKAAVDT TVASDSSLSP SAKTATPSPR GLAPTRVKSV ICTDTVYDGF GDEFRDQNNT
301: KAIVDSQVAS DLSLSSSAKT AVPSAHGSAG TGPCHGPLPD SSHDGVNLRE WLRAGHRKIN KVESLYIFRQ IVDLVDVSHS QGVAMQNLRP SCFKLLPSNQ
401: VAYLGSSVQR EMLENAVDQD VSLKNLLSGK RSLEKGMFPS ISLSGKKQND RLEEKWYTSP MELSEGVCTF SSNIYCLGVL LFELLGSFDS EKARAAAVSD
501: LRHRILPPNF LSENPKEAGF CLWLLHPESS SRPTTREILQ SEVISGLQEV HEGDLSSSIE QEDVDSELLL HFLILMKEQK HKHATKLVED IRCLEADIEE
601: VERRTSPKKS SLLSCSHKTA ICASEKRFIQ EGTPSAEACS EFPHFSDTYG LRLMRNISQL ESAYFSMRSK IQLPETDALT RSDKDLLLNR ENFYQAQKNG
701: EDLKVTDRLG TFFNGLCKYA RYSKFEVRGI LRNGDFINSA NVICSLSFDR DEDYLAAAGV SKKIKIFEFH ALFNDSVDIH YPVIEMTNKS KLSCICWNNY
801: IKNYLASTDY DGVVKLDNNS KSPSVRK
101: ANLAVVGPSN NRDRMQIRQN QWQHIHLLAG GQGTGSSVRD SVRRDNGQPM SSAWEDVGYS SFPEFLAQKQ SSHDHNEVRE QVTNCENRAV SGDTLSPGGI
201: RTKILSKSGF SEFFIKNSLK GKGVICRGPA RDGFGVEIRD SNITKAAVDT TVASDSSLSP SAKTATPSPR GLAPTRVKSV ICTDTVYDGF GDEFRDQNNT
301: KAIVDSQVAS DLSLSSSAKT AVPSAHGSAG TGPCHGPLPD SSHDGVNLRE WLRAGHRKIN KVESLYIFRQ IVDLVDVSHS QGVAMQNLRP SCFKLLPSNQ
401: VAYLGSSVQR EMLENAVDQD VSLKNLLSGK RSLEKGMFPS ISLSGKKQND RLEEKWYTSP MELSEGVCTF SSNIYCLGVL LFELLGSFDS EKARAAAVSD
501: LRHRILPPNF LSENPKEAGF CLWLLHPESS SRPTTREILQ SEVISGLQEV HEGDLSSSIE QEDVDSELLL HFLILMKEQK HKHATKLVED IRCLEADIEE
601: VERRTSPKKS SLLSCSHKTA ICASEKRFIQ EGTPSAEACS EFPHFSDTYG LRLMRNISQL ESAYFSMRSK IQLPETDALT RSDKDLLLNR ENFYQAQKNG
701: EDLKVTDRLG TFFNGLCKYA RYSKFEVRGI LRNGDFINSA NVICSLSFDR DEDYLAAAGV SKKIKIFEFH ALFNDSVDIH YPVIEMTNKS KLSCICWNNY
801: IKNYLASTDY DGVVKLDNNS KSPSVRK
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Arabidopsis Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.