Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G090080.3 | Barley | cytosol | 90.33 | 86.07 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 14.7 | 77.59 |
| Os05t0571000-01 | Rice | cytosol | 68.79 | 76.49 |
| EES19971 | Sorghum | cytosol | 63.36 | 71.45 |
| Zm00001d009617_P017 | Maize | mitochondrion | 63.84 | 70.86 |
| Zm00001d039072_P005 | Maize | cytosol | 61.71 | 69.96 |
| KRH25904 | Soybean | mitochondrion | 4.56 | 52.25 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 41.67 | 51.96 |
| KRH60015 | Soybean | plasma membrane | 33.1 | 50.18 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 40.25 | 47.76 |
| CDX83371 | Canola | nucleus | 31.45 | 44.79 |
| KRH41290 | Soybean | nucleus | 36.08 | 44.39 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 37.19 | 44.12 |
| Solyc08g081990.2.1 | Tomato | cytosol | 36.16 | 43.73 |
| CDX86817 | Canola | nucleus | 33.18 | 43.55 |
| CDX95691 | Canola | nucleus | 31.05 | 43.22 |
| CDY42035 | Canola | nucleus | 33.33 | 43.13 |
| CDY40851 | Canola | nucleus | 33.25 | 43.03 |
| CDX80009 | Canola | nucleus | 33.49 | 43.03 |
| Bra035252.1-P | Field mustard | nucleus | 33.02 | 42.86 |
| Bra004545.1-P | Field mustard | nucleus | 33.8 | 42.57 |
| Bra000420.1-P | Field mustard | nucleus | 31.84 | 42.5 |
| AT2G46340.2 | Thale cress | nucleus | 34.2 | 42.27 |
| AT4G11110.1 | Thale cress | nucleus | 34.2 | 41.99 |
| KRH27856 | Soybean | nucleus | 37.03 | 41.94 |
| KRH77627 | Soybean | nucleus | 36.71 | 41.36 |
| PGSC0003DMT400049874 | Potato | nucleus | 32.94 | 41.32 |
| Solyc10g011690.2.1 | Tomato | nucleus | 32.78 | 40.92 |
| KRH06512 | Soybean | nucleus | 31.84 | 39.59 |
| TraesCS3D01G284500.2 | Wheat | cytosol | 23.82 | 39.35 |
| KRH47949 | Soybean | nucleus | 31.92 | 39.23 |
| PGSC0003DMT400031699 | Potato | cytosol | 24.37 | 35.31 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 22.72 | 34.95 |
| TraesCS6D01G305800.1 | Wheat | nucleus | 16.9 | 30.76 |
| TraesCS6D01G045000.1 | Wheat | plastid | 7.86 | 24.51 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | EnsemblPlantsGene:TraesCS1D01G417600 |
| EnsemblPlants:TraesCS1D01G417600.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:475723391..475731263
Molecular Weight (calculated)
139786.0 Da
IEP (calculated)
6.803
GRAVY (calculated)
-0.637
Length
1272 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGARAAEVA GGGGAGDVQI KGAKESGQAA QQQQLLPTGS EPVEMPATPL PHAREIEWSE HFSFFNSMGT GTGTDGVMGP ASVGMSRSES SRPDSVTQQQ
0101: RCLAGSNADE RVEELTVRNC ISSEAHQPAA SAGGSTGGTG ERPAVMRGLW GNFTRMAWRT ADAASREALA VSLGNAMGSH NIDASGKGMP FDRGENGNTE
0201: FNMSFGNQQQ LQHILSSRLN QSEQHVLSSW QNQSEQHVLS SRQNQSEQHV LSSLPNQSEH NVLSSRPNQS EQHLPSSRQN QSEQHIMSSW PNQSXXXXXX
0301: XXLNHSEQNI PSSRPNQSEL HIPSSRPNQS EQHIPSSRTK QSEQHVLSSR PNQSEQHVLS SRPNQSEQHI LSSRPNQNEQ RSERDNGLKV SSFSNRIIDQ
0401: MRSKTLTPSS GLQGSPFKPV LKGKRVTYQG PHEEIQVQAN ARPRAPMDKI PKIPSSTHDS VARLDGTLFS SGGNVSESQY EGTSLRELIK PARQAMSKFE
0501: KMQLFKQILD HVDKSHAQGV TLQHLRPSYF IISSPNQVRY TGSYTKQDLS TPAKPDMAAD DVFNRKRCFD QKTLHQECNG NGHSILKYQK VGEQGSVAVR
0601: RPIHPFRTDH KGANQSEGAD LGALGQGNSS CTVGGRSKYG EPYYGGNASY GQRFPNYGNQ ESVLELRMLE DSWYRSPEEL NQLKGTSPSN IYSLGVLLFE
0701: LFCCCETWEL HCAAMSDLRH RILPPIFLSE SPKEAGFCLW LLHPDPFSRP KARDILGCDL INEGRDLSVL DKAPAAINEE DTESGLLLNF LSQLKEEKEM
0801: HAAKLSADLA SLQTDIVEAE RRHSFRMGFS LGDMDVPASS NDVPGTSSNA LRGASLSGLL TPPGRSGIYE ERVMKNLQQL EKAYYSTRST IDTSETNVIK
0901: RSDNDALRVR ENFNHRDADA MNGPTDPLGC FFDGLCKYAR HSRFEVRGIL KNADILNSPN VICSLSFDRD EEYFAAAGVS KKIKIFEFDA LLNDRVDIHY
1001: PIVEMPSKSK LSCVCWNNYI KNYLASTDYD GTVQLWDAST GQGFTQFTEH RKRAWSVSFS EVDPTKLASG SDDCCVKVWN INQKNSVDTI RNVANVCCVQ
1101: FSPYSSRMLA FGSADYKTYC YDLRHTRIPW CTISGHGKAV SYVRFLDAET LISASTDNTL KIWDLNRTNP NGLSTNACSL TLSGHTNEKN FVGLSVHDGY
1201: ITCGSENNEV YSYYKSFPMP ITSHKFGSID PITGQETNDD NQQFVSSVCW RGRSNMVVAA NSSGSIKVLE LV
0101: RCLAGSNADE RVEELTVRNC ISSEAHQPAA SAGGSTGGTG ERPAVMRGLW GNFTRMAWRT ADAASREALA VSLGNAMGSH NIDASGKGMP FDRGENGNTE
0201: FNMSFGNQQQ LQHILSSRLN QSEQHVLSSW QNQSEQHVLS SRQNQSEQHV LSSLPNQSEH NVLSSRPNQS EQHLPSSRQN QSEQHIMSSW PNQSXXXXXX
0301: XXLNHSEQNI PSSRPNQSEL HIPSSRPNQS EQHIPSSRTK QSEQHVLSSR PNQSEQHVLS SRPNQSEQHI LSSRPNQNEQ RSERDNGLKV SSFSNRIIDQ
0401: MRSKTLTPSS GLQGSPFKPV LKGKRVTYQG PHEEIQVQAN ARPRAPMDKI PKIPSSTHDS VARLDGTLFS SGGNVSESQY EGTSLRELIK PARQAMSKFE
0501: KMQLFKQILD HVDKSHAQGV TLQHLRPSYF IISSPNQVRY TGSYTKQDLS TPAKPDMAAD DVFNRKRCFD QKTLHQECNG NGHSILKYQK VGEQGSVAVR
0601: RPIHPFRTDH KGANQSEGAD LGALGQGNSS CTVGGRSKYG EPYYGGNASY GQRFPNYGNQ ESVLELRMLE DSWYRSPEEL NQLKGTSPSN IYSLGVLLFE
0701: LFCCCETWEL HCAAMSDLRH RILPPIFLSE SPKEAGFCLW LLHPDPFSRP KARDILGCDL INEGRDLSVL DKAPAAINEE DTESGLLLNF LSQLKEEKEM
0801: HAAKLSADLA SLQTDIVEAE RRHSFRMGFS LGDMDVPASS NDVPGTSSNA LRGASLSGLL TPPGRSGIYE ERVMKNLQQL EKAYYSTRST IDTSETNVIK
0901: RSDNDALRVR ENFNHRDADA MNGPTDPLGC FFDGLCKYAR HSRFEVRGIL KNADILNSPN VICSLSFDRD EEYFAAAGVS KKIKIFEFDA LLNDRVDIHY
1001: PIVEMPSKSK LSCVCWNNYI KNYLASTDYD GTVQLWDAST GQGFTQFTEH RKRAWSVSFS EVDPTKLASG SDDCCVKVWN INQKNSVDTI RNVANVCCVQ
1101: FSPYSSRMLA FGSADYKTYC YDLRHTRIPW CTISGHGKAV SYVRFLDAET LISASTDNTL KIWDLNRTNP NGLSTNACSL TLSGHTNEKN FVGLSVHDGY
1201: ITCGSENNEV YSYYKSFPMP ITSHKFGSID PITGQETNDD NQQFVSSVCW RGRSNMVVAA NSSGSIKVLE LV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.