Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42035 | Canola | nucleus | 81.34 | 85.15 |
| CDX80009 | Canola | nucleus | 81.34 | 84.55 |
| Bra004545.1-P | Field mustard | nucleus | 82.22 | 83.76 |
| CDX83371 | Canola | nucleus | 71.82 | 82.75 |
| CDX95691 | Canola | nucleus | 73.18 | 82.39 |
| Bra000420.1-P | Field mustard | nucleus | 75.7 | 81.74 |
| KRH25904 | Soybean | mitochondrion | 6.32 | 58.56 |
| GSMUA_Achr11P... | Banana | cytosol | 37.32 | 46.6 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 46.94 | 45.06 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 43.63 | 44.02 |
| KRH06512 | Soybean | nucleus | 42.57 | 42.82 |
| KRH47949 | Soybean | nucleus | 42.66 | 42.42 |
| PGSC0003DMT400049874 | Potato | nucleus | 41.69 | 42.31 |
| Solyc10g011690.2.1 | Tomato | nucleus | 41.11 | 41.51 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 41.4 | 39.74 |
| AT4G11110.1 | Thale cress | nucleus | 39.55 | 39.29 |
| Os05t0571000-01 | Rice | cytosol | 42.86 | 38.55 |
| EES19971 | Sorghum | cytosol | 41.89 | 38.21 |
| AT1G53090.1 | Thale cress | nucleus | 29.25 | 37.91 |
| Zm00001d009617_P017 | Maize | mitochondrion | 42.08 | 37.78 |
| Zm00001d039072_P005 | Maize | cytosol | 40.91 | 37.52 |
| AT3G15354.3 | Thale cress | nucleus | 29.15 | 35.5 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 42.27 | 34.2 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 42.08 | 32.43 |
| AT5G23730.1 | Thale cress | nucleus | 11.47 | 32.07 |
| AT2G32950.1 | Thale cress | nucleus | 20.31 | 30.96 |
| AT5G52250.1 | Thale cress | cytosol, plastid | 11.08 | 29.61 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | EntrezGene:819242 | UniProt:A0A178VSM9 |
| ProteinID:AAD23037.1 | ProteinID:AAD23038.1 | ProteinID:AEC10681.1 | EMBL:AF135455 | EMBL:AK221994 | EMBL:AK227186 |
| ProteinID:ANM63147.1 | ArrayExpress:AT2G46340 | EnsemblPlantsGene:AT2G46340 | RefSeq:AT2G46340 | TAIR:AT2G46340 | RefSeq:AT2G46340-TAIR-G |
| EnsemblPlants:AT2G46340.2 | Unigene:At.11156 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009640 | GO:GO:0009658 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010100 | GO:GO:0010114 | GO:GO:0010218 |
| GO:GO:0016043 | GO:GO:0016301 | GO:GO:0016604 | GO:GO:0016605 | GO:GO:0016607 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0042802 | GO:GO:0048575 | GO:GO:0080008 | GO:GO:2000028 | InterPro:IPR000719 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf | RefSeq:NP_001325255.1 | RefSeq:NP_182157.2 |
| ProteinID:OAP08846.1 | PFAM:PF00069 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50011 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF3 | InterPro:Prot_kinase_dom | UniProt:Q9SYX2 |
| SMART:SM00320 | Symbol:SPA1 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI00000A4F78 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
Coordinates
chr2:-:19022163..19027512
Molecular Weight (calculated)
114692.0 Da
IEP (calculated)
7.357
GRAVY (calculated)
-0.519
Length
1029 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.