Factsheet for GSMUA_Achr11P12240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P28130_001
GSMUA_Achr4P18680_001
GSMUA_Achr9P22690_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11110.1	GSMUA_Achr3P28130_001	AT5G15850.1	16854975
AT4G11110.1	GSMUA_Achr4P18680_001	AT5G15850.1	16854975
AT4G11110.1	GSMUA_Achr9P22690_001	AT5G15850.1	16854975

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01110.t01	Wine grape	cytosol, plastid	22.09	75.52
GSMUA_Achr1P13690_001	Banana	cytosol, mitochondrion, nucleus, plastid	4.85	51.95
KRH60015	Soybean	plasma membrane	46.36	45.53
KRH25904	Soybean	mitochondrion	6.07	45.05
GSMUA_Achr1P28310_001	Banana	nucleus	52.67	42.55
CDX83371	Canola	nucleus	43.45	40.09
GSMUA_Achr8P05740_001	Banana	nucleus	52.06	40.02
KRH41290	Soybean	nucleus	49.27	39.27
CDX95691	Canola	nucleus	43.08	38.84
VIT_15s0046g01310.t01	Wine grape	nucleus	50.36	38.71
CDX86817	Canola	nucleus	45.39	38.6
CDY40851	Canola	nucleus	45.63	38.25
Bra035252.1-P	Field mustard	nucleus	45.27	38.06
CDY42035	Canola	nucleus	45.39	38.05
AT4G11110.1	Thale cress	nucleus	47.69	37.93
Bra000420.1-P	Field mustard	nucleus	43.81	37.88
CDX80009	Canola	nucleus	45.15	37.58
PGSC0003DMT400049874	Potato	nucleus	46.12	37.48
AT2G46340.2	Thale cress	nucleus	46.6	37.32
Solyc10g011690.2.1	Tomato	nucleus	45.75	37.0
GSMUA_Achr3P31750_001	Banana	nucleus	34.47	36.98
Bra004545.1-P	Field mustard	nucleus	45.27	36.93
Solyc08g081990.2.1	Tomato	cytosol	46.97	36.79
KRH27856	Soybean	nucleus	49.76	36.51
KRH06512	Soybean	nucleus	44.9	36.17
KRH47949	Soybean	nucleus	44.78	35.65
KRH77627	Soybean	nucleus	48.66	35.52
GSMUA_Achr1P13700_001	Banana	nucleus	30.83	32.99
GSMUA_AchrUn_...	Banana	nucleus	23.91	30.83
GSMUA_Achr3P20130_001	Banana	nucleus	24.03	29.29
VIT_02s0025g01130.t01	Wine grape	cytosol	29.0	28.9
PGSC0003DMT400031699	Potato	cytosol	30.7	28.82
GSMUA_Achr9P23670_001	Banana	cytosol	6.92	21.92
GSMUA_Achr4P11950_001	Banana	mitochondrion	7.65	21.14

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.2	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G12240_001	EnsemblPlants:GSMUA_Achr11P12240_001	EnsemblPlants:GSMUA_Achr11T12240_001	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	InterPro:Kinase-like_dom_sf	UniProt:M0RRK4	PFAM:PF00400	PFAM:PF07714	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44218	PANTHER:PTHR44218:SF2	SMART:SM00320
SUPFAM:SSF50978	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI00029543CA	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

Putative Protein SPA1-RELATED 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G12240_001]

Coordinates

chr11:-:11218785..11227643

Molecular Weight (calculated)

92180.5 Da

IEP (calculated)

6.910

GRAVY (calculated)

-0.275

Length

824 amino acids

Sequence
(BLAST)

001: MLDRTRSLLS ENSPTFTKQV DAGNSFLPQV SIQTPPLSRQ FGQNFSELSG LGDKYILSDN HTFIDYTGAA QDCNPQDSGF ELFSVTNALK GKGVASRCPD
101: DVNFQTYADQ NDQLTAQTAP VGFQRSCVKS YCLSPLATIS ESLLGIHEEG ISLRSFLKPQ SSLNKVERLH MFKLIVDLIS SLHSQGFFLK HLCPSHFVML
201: QSKQVKYVGP LIPQGQMELE FNETLLTKHQ KVCEQFISPS HTVSDVLKLE ERWYASPEEL NEGSCSSSSN IYSLGVLLFE LFCHFESQKA HCVAMSNLHH
301: RILPPSFLSE HPKEAGICLW MLHPDPSSRP KISDILLCDI FRKDREASIM EQLSTSVDCE LSKADLLLHF LLALKEKKDK QTAKLMEDLG CVKADLEEIK
401: SRHFSTDHVH KDCTDGIISK MKNFGLLETA YFSMSSKSEH PDISSIVRQD IDVLRLKNQL CSAKNDASPS YMEKEPSDQR GSFFEGLRKY ARYKRFEVHG
501: SLRYTNILNS ANVICSLSFD QNEEYFAAAG ASKKIKVFEF GALINSTVDI HYPVIEMPSK SKHSCVCWNG YIRNYLASTD YGGVVQLWDA STGQGFHRYS
601: EHQKRAWSVD FSSEAPTKLA SGSDDCSVKL WSIHEKNCIK TIKNVANVCC VQFSSHSSHL LGFGSADYRI YCYDLRNTRI PWCTLAGHGK TVSYIKFLDC
701: DTIVSASTDN TLKLWDLKKT TASGLSTNAC SLTMTGHTNE KNFVGLSVCD GYVLCGSETN EVYAYQKTFP MPITSHKFGY IDPITGHEIA DDNGQFVSSV
801: CWKRTSNMAL AANSSGCIKL LQMV

Best Arabidopsis Sequence Match ( AT4G11110.1 )
(BLAST)

0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV

Arabidopsis Description

SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.