Factsheet for GSMUA_Achr3P31750_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P13690_001
GSMUA_Achr1P13700_001
GSMUA_Achr3P20130_001
GSMUA_Achr3P28130_001
GSMUA_Achr3P31750_001
GSMUA_Achr4P18680_001
GSMUA_Achr9P22690_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53090.1	GSMUA_Achr1P13690_001	AT1G53090.1	18812498
AT1G53090.1	GSMUA_Achr1P13700_001	AT1G53090.1	18812498
AT1G53090.1	GSMUA_Achr3P31750_001	AT1G53090.1	18812498
AT1G53090.1	GSMUA_Achr3P20130_001	AT2G32950.1	12887588
AT1G53090.1	GSMUA_AchrUn_...	AT2G32950.1	12887588
AT1G53090.1	GSMUA_Achr3P20130_001	AT2G32950.1	18812498
AT1G53090.1	GSMUA_AchrUn_...	AT2G32950.1	18812498
AT1G53090.1	GSMUA_Achr3P20130_001	AT2G32950.1	21798944
AT1G53090.1	GSMUA_AchrUn_...	AT2G32950.1	21798944
AT1G53090.1	GSMUA_Achr3P28130_001	AT5G15850.1	16854975
AT1G53090.1	GSMUA_Achr4P18680_001	AT5G15850.1	16854975
AT1G53090.1	GSMUA_Achr9P22690_001	AT5G15850.1	16854975
AT1G53090.1	GSMUA_Achr3P28130_001	AT5G15850.1	18812498
AT1G53090.1	GSMUA_Achr4P18680_001	AT5G15850.1	18812498
AT1G53090.1	GSMUA_Achr9P22690_001	AT5G15850.1	18812498

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13690_001	Banana	cytosol, mitochondrion, nucleus, plastid	6.9	68.83
TraesCS3A01G284700.2	Wheat	cytosol	62.24	61.68
TraesCS3B01G318600.1	Wheat	cytosol	61.46	61.38
TraesCS3D01G284500.2	Wheat	cytosol	61.46	61.3
Zm00001d043592_P004	Maize	cytosol	62.63	60.81
GSMUA_Achr1P13700_001	Banana	nucleus	60.81	60.65
KRH55271	Soybean	cytosol	10.03	60.63
OQU87453	Sorghum	cytosol	60.03	60.03
HORVU3Hr1G068840.2	Barley	cytosol, mitochondrion	59.64	59.95
Zm00001d011746_P002	Maize	nucleus	61.72	59.32
CDY50512	Canola	nucleus	53.78	55.96
Os01t0725800-01	Rice	nucleus	44.4	54.3
CDX98548	Canola	nucleus, plastid	56.12	54.28
VIT_12s0028g03570.t01	Wine grape	cytosol	62.89	54.09
Bra027259.1-P	Field mustard	nucleus, plastid	55.86	54.03
AT1G53090.1	Thale cress	nucleus	55.86	54.03
CDX97654	Canola	nucleus, plastid	55.86	53.96
CDY21834	Canola	nucleus, plastid	55.34	53.73
Solyc07g063120.2.1	Tomato	cytosol	57.94	53.61
Bra021100.1-P	Field mustard	nucleus	54.3	53.46
CDY20122	Canola	nucleus	54.43	53.05
KRH26155	Soybean	cytosol	54.04	52.66
VIT_19s0014g02660.t01	Wine grape	nucleus	61.59	51.86
AT3G15354.3	Thale cress	nucleus	56.77	51.6
Solyc12g013840.1.1	Tomato	nucleus	57.68	51.39
KRH55275	Soybean	cytosol	53.78	51.37
KRH27246	Soybean	plastid	60.42	51.16
PGSC0003DMT400039600	Potato	cytosol	57.55	50.92
Bra038098.1-P	Field mustard	nucleus	21.48	50.77
KRH22086	Soybean	plastid	59.77	50.66
CDY25880	Canola	nucleus	28.65	47.72
GSMUA_Achr11P...	Banana	cytosol	36.98	34.47
GSMUA_AchrUn_...	Banana	nucleus	27.08	32.55
GSMUA_Achr3P20130_001	Banana	nucleus	27.99	31.8
GSMUA_Achr1P28310_001	Banana	nucleus	39.06	29.41
GSMUA_Achr8P05740_001	Banana	nucleus	36.72	26.31
GSMUA_Achr9P23670_001	Banana	cytosol	7.81	23.08
GSMUA_Achr4P11950_001	Banana	mitochondrion	8.07	20.81

Protein Annotations

MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G31750_001	EnsemblPlants:GSMUA_Achr3P31750_001	EnsemblPlants:GSMUA_Achr3T31750_001	InterPro:IPR000719	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf	UniProt:M0SJI9	PFAM:PF00400	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44218	PANTHER:PTHR44218:SF1
InterPro:Prot_kinase_dom	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF56112	UniParc:UPI000294EBD5	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

Protein SPA1-RELATED 3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G31750_001]

Coordinates

chr3:+:29934395..29942958

Molecular Weight (calculated)

84945.8 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.312

Length

768 amino acids

Sequence
(BLAST)

001: MGGSEDASGR NTACVASSGS LRAASRGEGD DGAEEDEEGE EPRRRPICPS AAAGFEAGFG NEREVSLREW LDQPGRAVDL LQCLHIFRQI ADAVSAAHAQ
101: GVVVGNVRPS CFVMSSLDRV SFIESASCSS SSDSSEDGAG SPDGFGERGA TGTPESASEM PAVSACLEEA KERGEGDVGA GDRTAFPLKK ILLMESIWYT
201: SPEEATGRSG TFASDIYRLG VLLFELFCTF DSLEEKLITM SNLRHRVLPP QLLLKWPKEA SFCLWLLHPQ PDTRPKMSEV LHSEFLNQPR DSLEERDAAI
301: KLKEEIEDQE LLLDFLLHLQ QRKKEIADRL HDTVCFLSAD IEEVLHQQSI LKKKSYQELD NDEHSANFVP EENVAEGARS ETDQQIQENA LSKSSRTEGS
401: SVDDKVYRRG NTGETKSEWI NPFLDGLRKY LAFSKLKVRA DLKHGDLLNS MNLVCSMGFD RDKEFFATAG VNKKIKVFEC DTILNGDRDI HYPVTEMTNT
501: SKISCICWNN YIKSHIASSD FEGVVQVWDA TRSQVFAEMR EHERRVWSVD FSLADPTKLA SGSDDGAVKI WNINQAILFL HLAGSVCTVK TKANVCSVHF
601: QPDSAYSLAI GSADHKIYCY DLRNLRIPSC TLADHMKTVS YVKYLDSSTI VSASTDSSLK LWDLSTSISR MIETPLQTFT GHINIKNFVG LSISDGYIAT
701: GSETNEVFVY SKAFPMPVLS YKFSIIDPIS GKEVDDTSQF ISSVCWRGQT SMLLAASSSG NIKFLEMV

Best Arabidopsis Sequence Match ( AT3G15354.3 )
(BLAST)

001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT VKLWSINQGV SIGTIKTKAN VCCVQFPSDS GRSLAFGSAD HKVYYYDLRN
701: PKIPLCTMIG HSKTVSYVKF VDSSTLVSSS TDNTLKLWDL SMSASGINES PLHSFTGHTN LKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVMSYMFN
801: NTDSMSGLEV DDASQFISSI CWRGQSSTLV AANSNGNIKI LEMMT

Arabidopsis Description

SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.