Factsheet for Zm00001d011746_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011746_P002
Zm00001d018207_P001
Zm00001d043592_P004
Zm00001d052138_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53090.1	Zm00001d011746_P002	AT1G53090.1	18812498
AT1G53090.1	Zm00001d043592_P004	AT1G53090.1	18812498
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	12887588
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	12887588
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	18812498
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	18812498
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	21798944
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043592_P004	Maize	cytosol	93.12	94.06
OQU87453	Sorghum	cytosol	90.24	93.88
TraesCS3B01G318600.1	Wheat	cytosol	82.98	86.22
TraesCS3A01G284700.2	Wheat	cytosol	83.6	86.19
TraesCS3D01G284500.2	Wheat	cytosol	82.98	86.1
HORVU3Hr1G068840.2	Barley	cytosol, mitochondrion	80.35	84.03
Os01t0725800-01	Rice	nucleus	64.46	82.01
GSMUA_Achr3P31750_001	Banana	nucleus	59.32	61.72
KRH55271	Soybean	cytosol	9.14	57.48
CDY50512	Canola	nucleus	52.44	56.78
GSMUA_Achr1P13700_001	Banana	nucleus	52.94	54.94
Solyc07g063120.2.1	Tomato	cytosol	56.45	54.34
Bra021100.1-P	Field mustard	nucleus	52.94	54.23
AT1G53090.1	Thale cress	nucleus	53.69	54.03
CDY20122	Canola	nucleus	53.19	53.93
Bra038098.1-P	Field mustard	nucleus	21.78	53.54
CDX98548	Canola	nucleus, plastid	53.19	53.53
Bra027259.1-P	Field mustard	nucleus, plastid	52.82	53.15
CDX97654	Canola	nucleus, plastid	52.82	53.08
CDY21834	Canola	nucleus, plastid	52.44	52.97
KRH26155	Soybean	cytosol	52.07	52.79
KRH55275	Soybean	cytosol	51.81	51.49
Solyc12g013840.1.1	Tomato	nucleus	55.44	51.39
PGSC0003DMT400039600	Potato	cytosol	55.57	51.15
AT3G15354.3	Thale cress	nucleus	53.94	51.01
VIT_12s0028g03570.t01	Wine grape	cytosol	56.7	50.73
VIT_19s0014g02660.t01	Wine grape	nucleus	57.2	50.11
Zm00001d011892_P001	Maize	cytosol	7.76	49.6
KRH27246	Soybean	plastid	56.2	49.5
KRH22086	Soybean	plastid	55.69	49.12
CDY25880	Canola	nucleus	27.91	48.37
Zm00001d016202_P001	Maize	cytosol	6.76	41.86
Zm00001d052138_P004	Maize	nucleus	27.41	31.92
Zm00001d018207_P001	Maize	nucleus	27.53	31.75
Zm00001d039072_P005	Maize	cytosol	37.05	26.38
Zm00001d009617_P017	Maize	mitochondrion	37.42	26.09
Zm00001d014990_P001	Maize	cytosol	11.01	21.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.2	UniProt:A0A1D6G3L6
ProteinID:AQK97923.1	ProteinID:AQK97925.1	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf
PFAM:PF00400	PFAM:PF07714	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR44218	PANTHER:PTHR44218:SF1	InterPro:Prot_kinase_dom	SMART:SM00320	SUPFAM:SSF50978
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0008454878	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d011746	EnsemblPlants:Zm00001d011746_P002	EnsemblPlants:Zm00001d011746_T002	SEG:seg

Description

SPA1-related 3

Coordinates

chr8:+:160671478..160678347

Molecular Weight (calculated)

88879.5 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.374

Length

799 amino acids

Sequence
(BLAST)

001: MEPSRGGVGG GGRRWGEAEG DAAEEGRRGE DGGEVSLREW LDRPGRAVEA AECVHVFRQV AEAVAVAHAQ GVAVGSARPS CFVVSPPFAR VAFIESASGS
101: DASGSCSGSD ASEDADGDPD PDPDPDASPP LRRRDSAVPG EERAGRSFPL KSVLAMELSW YTSPEDADDS AATFASDVYR LGVLLFELFY TFETMEDKMR
201: AMANLRHRVL PPQLLFKWPK EASFCQLLMH PVPETRPKMS EVLQSEFLNQ SRNSLEEHEA ALRLREEIEE QELLLDFLQQ LQKRKQDIAD SLQGTIAFLS
301: SDINEVPHQQ STIGHCENFL SDGDKEVCSG TVEEQSDCGS RKRFRPELQG VDMEENNRSV EECSRTVPSS ELIQESVLSK SSRLMKNFKK LETAYFLTRS
401: KLMKQVGSQI SSCDRVVKNT TGSAVGTEGS SLDDFSLERQ YGTRQRGWVN SFLEGLCKYL SFSKLKVRAE LKHCDLLNSS NLVCSVGFDR DREFFATAGV
501: NKKIKVFEYN MIVNEHRDIH YPVVEMSNRS KLSCICWNSY MKSHIASSDF EGIVQVWDVT RSQVFVGMRE HERRVWSVDF SIVDPTKLVS GSDDGSVKLW
601: DMNQAILFLH LLYAGSIGTI RTRANVCSVQ FQPDTARSIA IGSADHKIYC YDLRNIRAPY CTLVGHTKTV SYVKYLDAST ILSASTDNSL KLWDLSMNPG
701: RIIDSPVQTF TGHTNTKNFV GLSISDGYIA TGSETNEVFV YHKEFPMPVL AYKFSVTDPI SGQEIDDQSQ FISCVCWRGQ SSTLLSANSS GNIKILEMD

Best Arabidopsis Sequence Match ( AT3G15354.3 )
(BLAST)

001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT VKLWSINQGV SIGTIKTKAN VCCVQFPSDS GRSLAFGSAD HKVYYYDLRN
701: PKIPLCTMIG HSKTVSYVKF VDSSTLVSSS TDNTLKLWDL SMSASGINES PLHSFTGHTN LKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVMSYMFN
801: NTDSMSGLEV DDASQFISSI CWRGQSSTLV AANSNGNIKI LEMMT

Arabidopsis Description

SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.