Factsheet for Zm00001d043592_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011746_P002
Zm00001d018207_P001
Zm00001d043592_P004
Zm00001d052138_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53090.1	Zm00001d011746_P002	AT1G53090.1	18812498
AT1G53090.1	Zm00001d043592_P004	AT1G53090.1	18812498
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	12887588
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	12887588
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	18812498
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	18812498
AT1G53090.1	Zm00001d018207_P001	AT2G32950.1	21798944
AT1G53090.1	Zm00001d052138_P004	AT2G32950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87453	Sorghum	cytosol	92.92	95.7
Zm00001d011746_P002	Maize	nucleus	94.06	93.12
TraesCS3D01G284500.2	Wheat	cytosol	85.84	88.18
TraesCS3B01G318600.1	Wheat	cytosol	85.71	88.17
TraesCS3A01G284700.2	Wheat	cytosol	86.09	87.87
HORVU3Hr1G068840.2	Barley	cytosol, mitochondrion	82.81	85.73
Os01t0725800-01	Rice	nucleus	65.87	82.96
GSMUA_Achr3P31750_001	Banana	nucleus	60.81	62.63
KRH55271	Soybean	cytosol	9.36	58.27
CDY50512	Canola	nucleus	53.1	56.91
GSMUA_Achr1P13700_001	Banana	nucleus	53.86	55.32
Solyc07g063120.2.1	Tomato	cytosol	57.52	54.82
AT1G53090.1	Thale cress	nucleus	54.74	54.53
Bra021100.1-P	Field mustard	nucleus	53.73	54.49
CDY20122	Canola	nucleus	53.98	54.19
CDX98548	Canola	nucleus, plastid	54.24	54.03
Bra027259.1-P	Field mustard	nucleus, plastid	53.98	53.78
CDX97654	Canola	nucleus, plastid	53.98	53.71
Bra038098.1-P	Field mustard	nucleus	21.87	53.23
CDY21834	Canola	nucleus, plastid	53.22	53.22
KRH26155	Soybean	cytosol	52.72	52.92
KRH55275	Soybean	cytosol	52.84	51.99
Solyc12g013840.1.1	Tomato	nucleus	55.88	51.28
Zm00001d011892_P001	Maize	cytosol	8.09	51.2
PGSC0003DMT400039600	Potato	cytosol	56.01	51.04
AT3G15354.3	Thale cress	nucleus	54.36	50.89
VIT_19s0014g02660.t01	Wine grape	nucleus	58.41	50.66
VIT_12s0028g03570.t01	Wine grape	cytosol	57.14	50.62
KRH27246	Soybean	plastid	57.65	50.28
KRH22086	Soybean	plastid	57.02	49.78
CDY25880	Canola	nucleus	28.19	48.37
Zm00001d016202_P001	Maize	cytosol	6.95	42.64
Zm00001d052138_P004	Maize	nucleus	27.94	32.22
Zm00001d018207_P001	Maize	nucleus	28.07	32.03
Zm00001d039072_P005	Maize	cytosol	37.67	26.56
Zm00001d009617_P017	Maize	mitochondrion	37.8	26.09
Zm00001d014990_P001	Maize	cytosol	11.25	21.39

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.16	MapMan:19.2.2.8.3.4.2	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.2	UniProt:A0A1D6NDH3
ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:Kinase-like_dom_sf	ProteinID:ONM38540.1	PFAM:PF00400
PFAM:PF07714	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR44218	PANTHER:PTHR44218:SF1	InterPro:Prot_kinase_dom	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000843F547	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d043592	EnsemblPlants:Zm00001d043592_P004	EnsemblPlants:Zm00001d043592_T004	SEG:seg	:

Description

SPA1-related 3

Coordinates

chr3:-:204511430..204518066

Molecular Weight (calculated)

88194.9 Da

IEP (calculated)

5.500

GRAVY (calculated)

-0.372

Length

791 amino acids

Sequence
(BLAST)

001: MEPSRGATGG ARRWGEAETE VDAAEEGRRA EDGGEVSLRE WLDRPGRAVE AAECVHVFRQ VAEAVAVAHA QGVAVGSARP SCFVVSPPFA RVAFIESASG
101: SDASGSCSGS DASEDADPDA SPPRRGDGAG RGEERAGKSF PLKSVLAMEL NWYTSPEEAD DSAATFASDV YRLGVLLFEL FCTFETMEDK MRAMANLRHR
201: VLPPQLLLKW PKEASFCQLL MHPVPETRPK MSEVLQSEFL NQSRNSLEER EAALRLREEI EEQELLLDFL QQLQKRKQDM ADSLQDTVAF LSSDINEVLH
301: QQSALGHCVN FSPDLDKEVC SGTVEDQSDC GSRKRFRPEL QGVDMEENNR SVEECSRTVP SSELIQENVL SKSSRLMKNL KKLETAYFLT RSKLAKQVGN
401: QINSCNRVVK RTTGSAVGTE ASSIDDFSLE RQYGRRQRGW VNSFLEGLCK YLSFSKLKVR AELKHCDSLN SSNLVCSVGF DRDREFFATA GVNKKIKVFE
501: YNMIVNEHRD IHYPVVEMSN RSKLSCISWN SYMKSHIASS DFEGIVQVWD VTRSQVFVEM REHERRVWSV DFSIVDPTKL VSGSDDGSVK LWDMNQAILF
601: LHLLYAGSIG TIKTRANVCS VQFQPDTARS IAIGSADHKI YCYDLRHIRA PYCTLVGHTK TVSYVKYLDA STIVSASTDN SLKLWDLSMS PGRIIDSPVQ
701: TFKGHTNTKN FVGLSISDGY IATGSETNEV FVYHKEFPMP VLAYKFSVTD PISGQEIDDQ SQFISCVCWR GQSSTLLSAN SSGNIKILEM D

Best Arabidopsis Sequence Match ( AT3G15354.3 )
(BLAST)

001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT VKLWSINQGV SIGTIKTKAN VCCVQFPSDS GRSLAFGSAD HKVYYYDLRN
701: PKIPLCTMIG HSKTVSYVKF VDSSTLVSSS TDNTLKLWDL SMSASGINES PLHSFTGHTN LKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVMSYMFN
801: NTDSMSGLEV DDASQFISSI CWRGQSSTLV AANSNGNIKI LEMMT

Arabidopsis Description

SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.