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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G318600.1 Wheat cytosol 93.85 93.24
TraesCS3D01G284500.2 Wheat cytosol 93.85 93.12
TraesCS3A01G284700.2 Wheat cytosol 93.06 91.74
OQU87453 Sorghum cytosol 85.6 85.16
Zm00001d043592_P004 Maize cytosol 85.73 82.81
Zm00001d011746_P002 Maize nucleus 84.03 80.35
Os01t0725800-01 Rice nucleus 64.4 78.34
GSMUA_Achr3P31750_001 Banana nucleus 59.95 59.64
KRH55271 Soybean cytosol 9.69 58.27
CDY50512 Canola nucleus 52.75 54.61
Solyc07g063120.2.1 Tomato cytosol 57.85 53.25
GSMUA_Achr1P13700_001 Banana nucleus 53.53 53.12
Bra021100.1-P Field mustard nucleus 53.93 52.82
CDY20122 Canola nucleus 54.19 52.54
AT1G53090.1 Thale cress nucleus 54.58 52.52
CDX98548 Canola nucleus, plastid 54.19 52.14
Bra027259.1-P Field mustard nucleus, plastid 54.19 52.14
CDX97654 Canola nucleus, plastid 54.19 52.08
Bra038098.1-P Field mustard nucleus 22.12 52.0
CDY21834 Canola nucleus, plastid 53.66 51.83
KRH26155 Soybean cytosol 52.88 51.27
KRH55275 Soybean cytosol 53.27 50.62
AT3G15354.3 Thale cress nucleus 55.76 50.41
Solyc12g013840.1.1 Tomato nucleus 56.28 49.88
PGSC0003DMT400039600 Potato cytosol 56.28 49.54
VIT_12s0028g03570.t01 Wine grape cytosol 57.72 49.38
VIT_19s0014g02660.t01 Wine grape nucleus 58.77 49.23
KRH27246 Soybean plastid 57.85 48.73
KRH22086 Soybean plastid 57.2 48.23
CDY25880 Canola nucleus 27.09 44.9
HORVU1Hr1G090080.3 Barley cytosol 38.87 22.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.16MapMan:19.2.2.8.3.4.2Gene3D:2.130.10.10UniProt:A0A287LI63InterPro:G-protein_beta_WD-40_rep
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU3Hr1G068840EnsemblPlants:HORVU3Hr1G068840.2InterPro:IPR000719
InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986InterPro:Kinase-like_dom_sfPFAM:PF00400PRINTS:PR00320
ScanProsite:PS00678PFscan:PS50011PFscan:PS50082PFscan:PS50294PANTHER:PTHR44218PANTHER:PTHR44218:SF1
InterPro:Prot_kinase_domSMART:SM00320SUPFAM:SSF50978SUPFAM:SSF56112UniParc:UPI000B46AA8AInterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfSEG:seg:
Description
No Description!
Coordinates
chrchr3H:-:521561134..521567700
Molecular Weight (calculated)
82458.9 Da
IEP (calculated)
5.362
GRAVY (calculated)
-0.343
Length
764 amino acids
Sequence
(BLAST)
001: MEVSRGGGAR XXXXXXXXXX XXXXXXXXXX XVEAPECLHV FRQVAEAVAD AHAQGVAVGS ARPSCFVVSP PFARVAFIES ASGSDASGSD ASEDADHDAE
101: PPRQGDGAGR AGEDRSEKGF PLKSVLAMEL NWYTSPEEAD DSGGGATFAS DVYRLGVLLF ELFCSFETLE EKMRAMANLR YRVLPPQLLL KWPKEASFCQ
201: LMMHPVPDTR PKMSEVLQSE FLNQSRNSLE EHDAALRLRE DIEEQELLLD FLLQLQKRKQ DVADNLQDTV AFLSSDINEV LHQQSALGQC GNFSVELDKE
301: VSSGTVEDQS DCGSRKRFRP ELHAVDMEEH SHSLEECSRT VPSSVLIQES VLSKSSRLMK NFKKLETAYF QTRSKLARQV GNPLSSRDQV VKSTTGSAVG
401: TEGSSIDDFA LEGHSGRRHR GWMNSFLEGL CRYLSFSQLK VRAELKQCDL LNSSNLVCSV GFDRDKEFFA TAGVNKKIKV FEYNMIVNEH RDIHYPVVEM
501: SNKSKLSCIS WNSYMKSHIA SSDFDGLVQV WDVTRSQVFV EMREHERRVW SVDFSLADPT KLVSGSDDGT VKLWSMNQAG SVGTIRTRAN VCSVQFQPDS
601: ARSIAIGSAD HKIYCYDLRN VRAPYCTLVG HTKTVSYVKY VDASTIVSGS TDNSLKLWDL SMNQARVIDN PIQTFTGHTN TKNFVGLSIS DGYIATGSET
701: NEVFVYHKAF PMPVLAYKFN VTDPISGQEI DDQSQFISCV CWRGQSSTLL SANSSGNIKV LEMD
Best Arabidopsis Sequence Match ( AT3G15354.3 )
(BLAST)
001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT VKLWSINQGV SIGTIKTKAN VCCVQFPSDS GRSLAFGSAD HKVYYYDLRN
701: PKIPLCTMIG HSKTVSYVKF VDSSTLVSSS TDNTLKLWDL SMSASGINES PLHSFTGHTN LKNFVGLSVS DGYIATGSET NEVFVYHKAF PMPVMSYMFN
801: NTDSMSGLEV DDASQFISSI CWRGQSSTLV AANSNGNIKI LEMMT
Arabidopsis Description
SPA3Protein SPA1-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.