Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G022380.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | HORVU0Hr1G022380.1 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G417600.1 | Wheat | cytosol | 86.07 | 90.33 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 14.01 | 77.59 |
| Os05t0571000-01 | Rice | cytosol | 64.87 | 75.7 |
| EES19971 | Sorghum | cytosol | 60.82 | 71.99 |
| Zm00001d009617_P017 | Maize | mitochondrion | 61.27 | 71.38 |
| Zm00001d039072_P005 | Maize | cytosol | 59.18 | 70.41 |
| KRH25904 | Soybean | mitochondrion | 4.34 | 52.25 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 39.4 | 51.57 |
| KRH60015 | Soybean | plasma membrane | 31.24 | 49.7 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 38.28 | 47.67 |
| CDX83371 | Canola | nucleus | 29.89 | 44.68 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 35.58 | 44.31 |
| CDX86817 | Canola | nucleus | 31.91 | 43.96 |
| KRH41290 | Soybean | nucleus | 34.01 | 43.91 |
| Solyc08g081990.2.1 | Tomato | cytosol | 34.38 | 43.63 |
| CDY40851 | Canola | nucleus | 32.06 | 43.54 |
| Bra035252.1-P | Field mustard | nucleus | 31.91 | 43.47 |
| CDX95691 | Canola | nucleus | 29.66 | 43.33 |
| CDY42035 | Canola | nucleus | 31.46 | 42.73 |
| CDX80009 | Canola | nucleus | 31.61 | 42.63 |
| Bra000420.1-P | Field mustard | nucleus | 30.34 | 42.5 |
| Bra004545.1-P | Field mustard | nucleus | 31.91 | 42.18 |
| AT2G46340.2 | Thale cress | nucleus | 32.43 | 42.08 |
| AT4G11110.1 | Thale cress | nucleus | 32.43 | 41.8 |
| KRH27856 | Soybean | nucleus | 34.83 | 41.41 |
| PGSC0003DMT400049874 | Potato | nucleus | 31.09 | 40.93 |
| KRH77627 | Soybean | nucleus | 34.61 | 40.92 |
| Solyc10g011690.2.1 | Tomato | nucleus | 30.86 | 40.43 |
| KRH47949 | Soybean | nucleus | 30.49 | 39.32 |
| KRH06512 | Soybean | nucleus | 30.11 | 39.3 |
| HORVU3Hr1G068840.2 | Barley | cytosol, mitochondrion | 22.25 | 38.87 |
| PGSC0003DMT400031699 | Potato | cytosol | 23.22 | 35.31 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 21.35 | 34.46 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | UniProt:A0A287GNT2 | ncoils:Coil |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU1Hr1G090080 | EnsemblPlants:HORVU1Hr1G090080.3 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf | PFAM:PF00400 | PRINTS:PR00320 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | SMART:SM00320 |
| SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI000B470A64 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:545249986..545257305
Molecular Weight (calculated)
147133.0 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.675
Length
1335 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGARAAELA GDVQIKGGQA AQPLPQDQQQ QLPTGSEAVE MPATPLPHAR EIEWSEHFSF FNSMATATGT GEPASVGMSR SESSRPDSVT QQQQQQQQRC
0101: LEDERVEELT VRNCISSEAQ QPAASAGGST SSSGERPAVM RGLWGNFTRM AWRTADAASR EALAVSRGDI ANMRNGDLVG RENLAVSLGN GMGSQNIDAS
0201: AKEMPFGRGE NGNAEFNMSF GNQQQQHILS SRPNQSEQHI LSSRPNQSEQ HILSPRPNQS EQHILSSRPN QSEQHILPSR QNQSEQHVMS SWLNQSELHI
0301: PSSRPNQSEQ HILPSRQNQS EQHVMSSWPN QSELHIPSSR PNHNGQHVLS SRPXXXXXXX XXXXXXXXEQ HVLSSRPNQN EQHVLSSRPN QSEQHVLSSR
0401: PNQSEQHVLS SRPNQSEQHI LSSRPNQSEQ HILSSRPNQS EQHILSSRPN QNEQRSEREN GPKVSSFSNR IIDQMRSKTL PPLSGVQGSP FKPVLKGKRV
0501: TYQGSHEEIQ VQANARPRTP MDKIPKIPSS THDSVARLDG TLFSSGGNVS ESQYEGTSLR ELIKPACQAM SKFEKMHLFK QILEHVDKSH AQGVTLQHLR
0601: PSYFIISSPN QVRYTGSYTK QDLSTPAKPD MAADDVFNRK RCFDQKTLHQ ECNGNGHSIL KYRKVGEQGS VAVRRPIHPF WTDHKVGNQS DGADLGALGQ
0701: KFGEPYYGGN ASYGQRLPSY GNQESVLELR MLEDSWYRSP EELNQLKGTF PANIYSLGVL LFELFSCCET WELHCAAMSD LRHRILPPSF LSESPKEAGF
0801: CLWLLHPDPF SRPKARDILG CDLINEGRDL SLLDKAPAAI SEEDTESGLL LNFLSQLKEE KETQAAKLSA DLSSLQTDIV EAERRHSLRM GFSLEDMDVP
0901: ASSNDVPGTS SNALRGASLS GLLPPSGRSD IYEERVMKNL QQLENAYYST RSTIDTSETN VIKRSDNDAL RVRENFNHSD DDAMAVPTDR LGCFFDGLCK
1001: YARHSRFEVR GILKNADILN SPNVICSLSF DRDEEYFAAA GVSKKIKIFE FDALLNDRVD IHYPIVEMPS KSKLSCVCWN NYIKNYLAST DYDGTVQLWD
1101: ASTGQGFTQF TEHRKRAWSV SFSEVDPTKL ASGSDDCCVK VWNINQKNSI DTIRNVANVC CVQFSPYSSR MLAFGSADYK TYCYDLRHTR IPWCTISGHG
1201: KAVSYVRFLD AETLISASTD NTLKIWDLNR TNPNGLSTNA CSLTLSGHTN EKNFVGLSVH DGYITCGSEN NEVYSYYKSF PMPITSHKFG SIDPITGQET
1301: NDDNQQFVSS VCWRGRSNMV VAANSSGSIK VLELV
0101: LEDERVEELT VRNCISSEAQ QPAASAGGST SSSGERPAVM RGLWGNFTRM AWRTADAASR EALAVSRGDI ANMRNGDLVG RENLAVSLGN GMGSQNIDAS
0201: AKEMPFGRGE NGNAEFNMSF GNQQQQHILS SRPNQSEQHI LSSRPNQSEQ HILSPRPNQS EQHILSSRPN QSEQHILPSR QNQSEQHVMS SWLNQSELHI
0301: PSSRPNQSEQ HILPSRQNQS EQHVMSSWPN QSELHIPSSR PNHNGQHVLS SRPXXXXXXX XXXXXXXXEQ HVLSSRPNQN EQHVLSSRPN QSEQHVLSSR
0401: PNQSEQHVLS SRPNQSEQHI LSSRPNQSEQ HILSSRPNQS EQHILSSRPN QNEQRSEREN GPKVSSFSNR IIDQMRSKTL PPLSGVQGSP FKPVLKGKRV
0501: TYQGSHEEIQ VQANARPRTP MDKIPKIPSS THDSVARLDG TLFSSGGNVS ESQYEGTSLR ELIKPACQAM SKFEKMHLFK QILEHVDKSH AQGVTLQHLR
0601: PSYFIISSPN QVRYTGSYTK QDLSTPAKPD MAADDVFNRK RCFDQKTLHQ ECNGNGHSIL KYRKVGEQGS VAVRRPIHPF WTDHKVGNQS DGADLGALGQ
0701: KFGEPYYGGN ASYGQRLPSY GNQESVLELR MLEDSWYRSP EELNQLKGTF PANIYSLGVL LFELFSCCET WELHCAAMSD LRHRILPPSF LSESPKEAGF
0801: CLWLLHPDPF SRPKARDILG CDLINEGRDL SLLDKAPAAI SEEDTESGLL LNFLSQLKEE KETQAAKLSA DLSSLQTDIV EAERRHSLRM GFSLEDMDVP
0901: ASSNDVPGTS SNALRGASLS GLLPPSGRSD IYEERVMKNL QQLENAYYST RSTIDTSETN VIKRSDNDAL RVRENFNHSD DDAMAVPTDR LGCFFDGLCK
1001: YARHSRFEVR GILKNADILN SPNVICSLSF DRDEEYFAAA GVSKKIKIFE FDALLNDRVD IHYPIVEMPS KSKLSCVCWN NYIKNYLAST DYDGTVQLWD
1101: ASTGQGFTQF TEHRKRAWSV SFSEVDPTKL ASGSDDCCVK VWNINQKNSI DTIRNVANVC CVQFSPYSSR MLAFGSADYK TYCYDLRHTR IPWCTISGHG
1201: KAVSYVRFLD AETLISASTD NTLKIWDLNR TNPNGLSTNA CSLTLSGHTN EKNFVGLSVH DGYITCGSEN NEVYSYYKSF PMPITSHKFG SIDPITGQET
1301: NDDNQQFVSS VCWRGRSNMV VAANSSGSIK VLELV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.