Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g089500.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11110.1 | Solyc02g089500.2.1 | AT5G15850.1 | 16854975 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031699 | Potato | cytosol | 78.14 | 93.62 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 17.78 | 77.59 |
| KRH60015 | Soybean | plasma membrane | 42.3 | 53.04 |
| KRH41290 | Soybean | nucleus | 48.95 | 49.81 |
| GSMUA_Achr11P... | Banana | cytosol | 36.79 | 46.97 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 36.88 | 46.92 |
| KRH27856 | Soybean | nucleus | 49.9 | 46.75 |
| KRH77627 | Soybean | nucleus | 49.33 | 45.97 |
| CDX86817 | Canola | nucleus | 41.35 | 44.89 |
| AT4G11110.1 | Thale cress | nucleus | 44.2 | 44.88 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 43.06 | 44.41 |
| CDY40851 | Canola | nucleus | 41.16 | 44.05 |
| Bra035252.1-P | Field mustard | nucleus | 40.97 | 43.98 |
| EES19971 | Sorghum | cytosol | 44.2 | 41.22 |
| Zm00001d039072_P005 | Maize | cytosol | 43.35 | 40.64 |
| Solyc10g011690.2.1 | Tomato | nucleus | 39.35 | 40.63 |
| Zm00001d009617_P017 | Maize | mitochondrion | 43.54 | 39.97 |
| Os05t0571000-01 | Rice | cytosol | 43.44 | 39.95 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 40.49 | 39.74 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 43.73 | 36.16 |
| Solyc07g063120.2.1 | Tomato | cytosol | 28.23 | 35.78 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 43.63 | 34.38 |
| Solyc12g013840.1.1 | Tomato | nucleus | 28.14 | 34.34 |
| Solyc11g011980.1.1 | Tomato | nucleus | 20.53 | 32.14 |
| Solyc12g005950.1.1 | Tomato | nucleus | 20.44 | 31.76 |
| Solyc11g005190.1.1 | Tomato | cytosol | 10.55 | 30.83 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | UniProt:K4CPJ5 | InterPro:Kinase-like_dom_sf | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF2 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | EnsemblPlantsGene:Solyc08g081990.2 | EnsemblPlants:Solyc08g081990.2.1 | UniParc:UPI000276C4B1 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
Protein SPA1-RELATED 2 [Source:Projected from Arabidopsis thaliana (AT4G11110) UniProtKB/Swiss-Prot;Acc:Q9T014]
Coordinates
chr8:-:64901369..64908700
Molecular Weight (calculated)
117535.0 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.505
Length
1052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEAVDEAIG DEVNGLDAID GRQLRIKEIE YALRSGNSIM LQSHEVVTLG EGDHYQTTPN FYTHILDRKN LDRIGSSEHA SSSPRCMNDA GLMVEELTLR
0101: NYNGKNLAVV GTLGNKETMH IRPNQWFYQL AGGSACASSH GEAAYRDRCR ASSGIWEEED GDTLFTGLLN QNQNTSNENH NLGGENLQSN GDKAILNNVL
0201: SSPEGIRTKI ISKSGFSQYF VKSTLKGKGI ICKTQLPRVS ASESRGQIHS QCTNASSTVA SMDAFVNPNV YHDGISLRER LKAGGNKLNK DEGLYIFKQV
0301: LGLVDFAHSQ GISVQDLRPS CFKLLHSNQV VYSGASVRSQ LNEYVVDRGV SLSENNQKER SSAGKNISSL VDPCVKKQKL SENMHQKMKW PQYPFMSGHK
0401: SASRNTKLNA APGYEDESNE EDCLKKEPNN PSKFRLPQLS IMSKPSLTSM SFKLEEKWYT SPEQFTEGGC TFSSNIYCLG VLLFELLASF DCESSHAAAM
0501: LDLRHRILPS CFLSEHPKEA GFCLWLLHPE PSARPTTREI LQSGVIAEIK ELPGDVSLSS IHEEESESEL LLYFLMSLKD QKQKDATKLV EELKCIEADV
0601: QEVQRRRSSK ALFPSSHPES LVQRQTRFIQ KGASSSDEYP KLPPVCENET RLIKNIKQLE SAYSSMRSNI QPSDNVAMVR RTEELFNNQE NFVSPENDKE
0701: KYRPTDRLGG FFDGLCKYGR YSKFRARGIL RNADLNNFAN VICSLSFDRD EEYLAAGGVS KKIKVFEYHA LFNDSVDIHY PIIEMSNKSK LSCICWNNYI
0801: RNYLATTDYD GAVKLWDVST GQAFLHLTEH NERAWSVDFS RVDPTKLASG SDDHLVKLWS INEKNSVCTI RNKANVCSVQ FSPDSSHFLA YSSADYKTYC
0901: YDLRNTSAPW CILAGHEKSV SYAKFLDAET LISASTDNSL KIWDLNKTNP SGYSTDACVL TLKGHTNEKN FVGLSVNNGY ITCGSETNEV FAYYKSLPMP
1001: ITSHKFGSID PISGKETDDD NGQFVSSVCW RQKSNTVLAA SSSGCIKLLE LV
0101: NYNGKNLAVV GTLGNKETMH IRPNQWFYQL AGGSACASSH GEAAYRDRCR ASSGIWEEED GDTLFTGLLN QNQNTSNENH NLGGENLQSN GDKAILNNVL
0201: SSPEGIRTKI ISKSGFSQYF VKSTLKGKGI ICKTQLPRVS ASESRGQIHS QCTNASSTVA SMDAFVNPNV YHDGISLRER LKAGGNKLNK DEGLYIFKQV
0301: LGLVDFAHSQ GISVQDLRPS CFKLLHSNQV VYSGASVRSQ LNEYVVDRGV SLSENNQKER SSAGKNISSL VDPCVKKQKL SENMHQKMKW PQYPFMSGHK
0401: SASRNTKLNA APGYEDESNE EDCLKKEPNN PSKFRLPQLS IMSKPSLTSM SFKLEEKWYT SPEQFTEGGC TFSSNIYCLG VLLFELLASF DCESSHAAAM
0501: LDLRHRILPS CFLSEHPKEA GFCLWLLHPE PSARPTTREI LQSGVIAEIK ELPGDVSLSS IHEEESESEL LLYFLMSLKD QKQKDATKLV EELKCIEADV
0601: QEVQRRRSSK ALFPSSHPES LVQRQTRFIQ KGASSSDEYP KLPPVCENET RLIKNIKQLE SAYSSMRSNI QPSDNVAMVR RTEELFNNQE NFVSPENDKE
0701: KYRPTDRLGG FFDGLCKYGR YSKFRARGIL RNADLNNFAN VICSLSFDRD EEYLAAGGVS KKIKVFEYHA LFNDSVDIHY PIIEMSNKSK LSCICWNNYI
0801: RNYLATTDYD GAVKLWDVST GQAFLHLTEH NERAWSVDFS RVDPTKLASG SDDHLVKLWS INEKNSVCTI RNKANVCSVQ FSPDSSHFLA YSSADYKTYC
0901: YDLRNTSAPW CILAGHEKSV SYAKFLDAET LISASTDNSL KIWDLNKTNP SGYSTDACVL TLKGHTNEKN FVGLSVNNGY ITCGSETNEV FAYYKSLPMP
1001: ITSHKFGSID PISGKETDDD NGQFVSSVCW RQKSNTVLAA SSSGCIKLLE LV
0001: MMDEGSVGDV SRIDEADVAH LQFKNSEQSF KPENIEVREV KEVQVQREAG SPDCSYGVIA DFLDGKNGGD HVELIGNEPC SSRQNTNDEG DVVEELTVKT
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
0101: CEGSSMAIVG RPSSRARLEM NRSQFLHRFP LDGDLPGSSS MSKKVIDRGT VSILRNAGKM SLPETSNGQL AIIAVNGEAN EHLTNVERNP VPVEALSHEG
0201: IKTKMLSQSG FSQFFVRKTL KGKGVTFRGP PNNRSKARNM DQQTVASSGS ALVIANTSAK ISSSIPLAAY DGLPCLPSNT SKPSSCANPS DTHRGCGGEG
0301: LSLREWLKSE RQEVNKAECM YIFRQIVDHV DCSHSQGVVL CDLRPSSFKI FKENAVKYVV SGSQRESFDS NMNKETLSQL ENPLVRRRLG DTSSLSIPAK
0401: KQKSSGPSSR QWPMFQRAGG VNIQTENNDG AIQEFHFRSS QPHCSTVACP FTSVSEQLEE KWYASPEELR GDMRSASSNI YSLGILLYEL LSQFQCERAR
0501: EAAMSDIRHR ILPPKFLSEN PKEAGFCLWL LHPESSCRPS TRDILQSEVV NGIPDLYAEG LSLSIEQEDT ESELLQHFLF LSQEKRQKHA GNLMEEIASV
0601: EADIEEIVKR RCAIGPPSLE EASSSSPASS VPEMRLIRNI NQLESAYFAA RIDAHLPEAR YRLRPDRDLL RNSDNTVAEV ENSETWSSDD RVGAFFDGLC
0701: KYARYSKFET RGVLRTSELN NTSNVICSLG FDRDEDYFAT AGVSKKIKIY EFNSLFNESV DIHYPAIEMP NRSKLSGVCW NNYIRNYLAS SDYDGIVKLW
0801: DVTTGQAISH FIEHEKRAWS VDFSEACPTK LASGSDDCSV KLWNINERNC LGTIRNIANV CCVQFSPQSS HLLAFGSSDF RTYCYDLRNL RTPWCILSGH
0901: NKAVSYAKFL DNETLVTAST DNTLKLWDLK KTTHGGLSTN ACSLTFGGHT NEKNFVGLST SDGYIACGSE TNEVYAYHRS LPMPITSYKF GSIDPISGKE
1001: IEEDNNLFVS SVCWRKRSNM VVSASSNGSI KVLQLV
Arabidopsis Description
SPA2Protein SPA1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T014]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.