Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039072_P005 | Maize | cytosol | 88.65 | 89.13 |
| Zm00001d009617_P017 | Maize | mitochondrion | 89.54 | 88.13 |
| Os05t0571000-01 | Rice | cytosol | 76.24 | 75.17 |
| VIT_02s0025g01110.t01 | Wine grape | cytosol, plastid | 15.87 | 74.27 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 71.45 | 63.36 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 71.99 | 60.82 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 48.05 | 53.14 |
| KRH25904 | Soybean | mitochondrion | 5.14 | 52.25 |
| KRH60015 | Soybean | plasma membrane | 37.23 | 50.06 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 46.1 | 48.51 |
| KRH41290 | Soybean | nucleus | 40.6 | 44.29 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 42.02 | 44.22 |
| Solyc08g081990.2.1 | Tomato | cytosol | 41.22 | 44.2 |
| CDX83371 | Canola | nucleus | 34.84 | 44.01 |
| CDX86817 | Canola | nucleus | 36.88 | 42.93 |
| CDX95691 | Canola | nucleus | 34.4 | 42.45 |
| Bra035252.1-P | Field mustard | nucleus | 36.7 | 42.24 |
| CDY40851 | Canola | nucleus | 36.79 | 42.22 |
| CDX80009 | Canola | nucleus | 36.88 | 42.02 |
| Bra000420.1-P | Field mustard | nucleus | 35.46 | 41.97 |
| AT2G46340.2 | Thale cress | nucleus | 38.21 | 41.89 |
| CDY42035 | Canola | nucleus | 36.35 | 41.71 |
| PGSC0003DMT400049874 | Potato | nucleus | 37.06 | 41.22 |
| AT4G11110.1 | Thale cress | nucleus | 37.85 | 41.22 |
| Bra004545.1-P | Field mustard | nucleus | 36.88 | 41.19 |
| KRH27856 | Soybean | nucleus | 40.96 | 41.14 |
| Solyc10g011690.2.1 | Tomato | nucleus | 36.88 | 40.82 |
| KRH77627 | Soybean | nucleus | 40.78 | 40.74 |
| KRH06512 | Soybean | nucleus | 36.44 | 40.18 |
| KRH47949 | Soybean | nucleus | 36.35 | 39.61 |
| OQU87453 | Sorghum | cytosol | 26.15 | 38.41 |
| PGSC0003DMT400031699 | Potato | cytosol | 28.19 | 36.22 |
| VIT_02s0025g01130.t01 | Wine grape | cytosol | 26.42 | 36.03 |
| KXG31183 | Sorghum | nucleus, plastid | 18.97 | 30.79 |
| OQU84205 | Sorghum | plastid | 9.04 | 20.52 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | EntrezGene:8074618 | UniProt:C5YVZ7 |
| ncoils:Coil | EnsemblPlants:EES19971 | ProteinID:EES19971 | ProteinID:EES19971.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 |
| PANTHER:PTHR44218:SF2 | SMART:SM00320 | EnsemblPlantsGene:SORBI_3009G238000 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | unigene:Sbi.9933 |
| UniParc:UPI0001A892DB | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| RefSeq:XP_002441541.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:57602900..57611460
Molecular Weight (calculated)
124536.0 Da
IEP (calculated)
6.155
GRAVY (calculated)
-0.450
Length
1128 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGTTAAEVG GAGGGAAGDV QIKGTKENGQ PAAVAAGPPP QPSGSEALEM PATPVTRDLD WSEHFSFFTS LGGFGASSDG ARGLTSVGLS NSESRPDSVT
0101: QRGLDHDAEE RVEELTLKNC INNDVQPEVS AGGSTSSGDK PTVIKGLWGN FTRMARRTSD LPSRENAAAL SYGDIANLRA ADGSSRENLA TSLANNNIIS
0201: RNNDASGNEA PMSRVGYVNN EFMTPFRSQQ ILLSPWSNQD NALKVSSFSN RILDRMRSKT VAPQSVVLGS PLKSKSKGKG VAYQGVREEI QGQANARPRD
0301: PLDKIPTIPT SIHDSMARVD PMLFTTGGNV SKSHSEGTCL RELIKPGRQT MTKFDKMHLF KQILDLVDKC HAQGFTLQHL RPSYFTTLSS NQVKYIGSYT
0401: TQDLPTSIKQ EVAREDLVNR KRAFGHRIDH QDSNGYGNLM LKYQKVGGQG SVAIRRPANT FWTDQICDNQ NEDVDPGVSR QENFSYTARE RFKFVEPYGN
0501: NTSGAQHVSS SGTQQPAFEL RNLEESWYKS PEELSQFKGT FPSNIYSLGV LLFELFCCSE TWEVHCAAMS NLRQRILPRN FLSESPKEAG FCLWLLHPDP
0601: CSRPKAKEIL GCDLINEGRD LSLLDQAPVS ISEDDTESSL LFNFLSQLKE EKEMLAAKLS AELGSLETDI TEVERRHSAR MRLSLEDTDV LPSSGVLSGA
0701: SVSAVQGALL SGLLPTSCKS SVYEERVMRN LVQLENAYYS MRSSVDTSET NAIKRPDNEA LRVRENFHQL HSDFDAKGEK TDRLGCFFDG LCKYARHSRF
0801: EVRGILKNAD ILNSPNVICS LSFDRDEEYF AAAGVSKKIK IFEFDALLND RVDIHYPLVE MPSKSKLSCV SWNNYIKNYL ASTDYDGTVQ LWDASSGQGF
0901: TQFTEHRKRA WSVSFSEVDP TMLASGSDDC CVKVWSINQR NCIDTIRNVA NVCCVQFSPY SSRMLAFGSA DYKIYCYDLR NTRIPWCTIS GHGKAVSYVR
1001: FLDPETLISA STDNTLKIWD LNRTNCSGLS TDSCSLTLNG HTNEKNFVGL SVHDGYITCG SETNEVFSYY KTFPMPITSH RFGSIDPITG QVTNEDNQQF
1101: VSSVCWRGKS NMVVAANSSG SIKVLELV
0101: QRGLDHDAEE RVEELTLKNC INNDVQPEVS AGGSTSSGDK PTVIKGLWGN FTRMARRTSD LPSRENAAAL SYGDIANLRA ADGSSRENLA TSLANNNIIS
0201: RNNDASGNEA PMSRVGYVNN EFMTPFRSQQ ILLSPWSNQD NALKVSSFSN RILDRMRSKT VAPQSVVLGS PLKSKSKGKG VAYQGVREEI QGQANARPRD
0301: PLDKIPTIPT SIHDSMARVD PMLFTTGGNV SKSHSEGTCL RELIKPGRQT MTKFDKMHLF KQILDLVDKC HAQGFTLQHL RPSYFTTLSS NQVKYIGSYT
0401: TQDLPTSIKQ EVAREDLVNR KRAFGHRIDH QDSNGYGNLM LKYQKVGGQG SVAIRRPANT FWTDQICDNQ NEDVDPGVSR QENFSYTARE RFKFVEPYGN
0501: NTSGAQHVSS SGTQQPAFEL RNLEESWYKS PEELSQFKGT FPSNIYSLGV LLFELFCCSE TWEVHCAAMS NLRQRILPRN FLSESPKEAG FCLWLLHPDP
0601: CSRPKAKEIL GCDLINEGRD LSLLDQAPVS ISEDDTESSL LFNFLSQLKE EKEMLAAKLS AELGSLETDI TEVERRHSAR MRLSLEDTDV LPSSGVLSGA
0701: SVSAVQGALL SGLLPTSCKS SVYEERVMRN LVQLENAYYS MRSSVDTSET NAIKRPDNEA LRVRENFHQL HSDFDAKGEK TDRLGCFFDG LCKYARHSRF
0801: EVRGILKNAD ILNSPNVICS LSFDRDEEYF AAAGVSKKIK IFEFDALLND RVDIHYPLVE MPSKSKLSCV SWNNYIKNYL ASTDYDGTVQ LWDASSGQGF
0901: TQFTEHRKRA WSVSFSEVDP TMLASGSDDC CVKVWSINQR NCIDTIRNVA NVCCVQFSPY SSRMLAFGSA DYKIYCYDLR NTRIPWCTIS GHGKAVSYVR
1001: FLDPETLISA STDNTLKIWD LNRTNCSGLS TDSCSLTLNG HTNEKNFVGL SVHDGYITCG SETNEVFSYY KTFPMPITSH RFGSIDPITG QVTNEDNQQF
1101: VSSVCWRGKS NMVVAANSSG SIKVLELV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.