Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83371 | Canola | nucleus | 86.87 | 88.91 |
| CDX80009 | Canola | nucleus | 79.54 | 73.43 |
| CDY42035 | Canola | nucleus | 78.77 | 73.25 |
| AT2G46340.2 | Thale cress | nucleus | 82.39 | 73.18 |
| KRH25904 | Soybean | mitochondrion | 6.67 | 54.95 |
| GSMUA_Achr11P... | Banana | cytosol | 38.84 | 43.08 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 48.69 | 41.51 |
| CDY19171 | Canola | cytosol | 11.05 | 40.08 |
| PGSC0003DMT400049874 | Potato | nucleus | 44.42 | 40.04 |
| KRH06512 | Soybean | nucleus | 44.31 | 39.59 |
| Solyc10g011690.2.1 | Tomato | nucleus | 43.87 | 39.35 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 43.65 | 39.12 |
| CDY50512 | Canola | nucleus | 31.51 | 39.02 |
| KRH47949 | Soybean | nucleus | 43.98 | 38.84 |
| CDY40851 | Canola | nucleus | 40.48 | 37.64 |
| CDX86817 | Canola | nucleus | 39.82 | 37.56 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 42.56 | 36.29 |
| CDX98548 | Canola | nucleus, plastid | 31.29 | 36.02 |
| CDY20122 | Canola | nucleus | 30.85 | 35.79 |
| CDY21834 | Canola | nucleus, plastid | 30.96 | 35.78 |
| CDX97654 | Canola | nucleus, plastid | 31.07 | 35.72 |
| CDX79494 | Canola | cytosol | 3.94 | 34.95 |
| Os05t0571000-01 | Rice | cytosol | 43.54 | 34.79 |
| EES19971 | Sorghum | cytosol | 42.45 | 34.4 |
| Zm00001d039072_P005 | Maize | cytosol | 42.01 | 34.22 |
| Zm00001d009617_P017 | Maize | mitochondrion | 42.78 | 34.12 |
| CDX87159 | Canola | cytosol | 12.69 | 31.35 |
| CDY16865 | Canola | nucleus | 12.69 | 31.27 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 43.22 | 31.05 |
| CDY32590 | Canola | cytosol | 11.93 | 30.79 |
| CDY38909 | Canola | cytosol | 11.82 | 30.68 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 43.33 | 29.66 |
| CDY12145 | Canola | nucleus | 21.66 | 29.29 |
| CDY52540 | Canola | nucleus | 21.66 | 29.25 |
| CDY25880 | Canola | nucleus | 13.35 | 26.46 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | GO:A0A078E2Z6 | EnsemblPlants:CDX95691 |
| ProteinID:CDX95691 | ProteinID:CDX95691.1 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00101580001 | InterPro:IPR000719 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF3 | InterPro:Prot_kinase_dom | SMART:SM00320 | SUPFAM:SSF50978 |
| SUPFAM:SSF56112 | UniParc:UPI0004EE0C4C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC03g25720D
Coordinates
chrLK031890:-:668822..672953
Molecular Weight (calculated)
102112.0 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.494
Length
914 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVVDDINK PPPPVEESVG ASSKICVEEL RLVNNRVVQG SNVDSSCSRS DKFEHVYNNL ARGSPPAFRV GDGDLHSQML SRIRQQLAGS SSERLDYINR
101: RRSHQNLEAF SQRLRAAGDN IINMNAPALS SSSFSQVILK SAMKGENQET PPDFVSDQDC KEIKLDNSNS PIPGYSSHKG HGDGNSLREF LISSYGKRER
201: RHGLSLFTQL VELVDSSHSQ GLFLMDLRPS LFALVPSKKL RYTGTFGKNN ADEDLNTKRP WTQESSIVGR GVLKKRKTDL HEPSPGNQLE APSTGRPFER
301: ISPVIDLNVV DAYNQDSCEL QQQNYGKSLG VASMTTRKQS MSTWLEEQWY TCPEQINGED SGEKSNIYAL GVLLFELLCH CESSEMHAAM MADLRYRILP
401: PAILSKYPEE AGFCLWLLHP EPSSRPTARE ILKSELISKN HDSAISTAAD EEMSELLLHF LSSLEKQKKK NATKLLQDIQ TLEDDIKEAE QRYSSNASLV
501: RSHGAMETRL QSSLMSNIHQ LEDAYFFMRS QMKLSNSACH SDKSLLKDRD RWSENQNENQ DTKTKGKSSD QVEVFFEGLC KFARYSKFET CGTIRSGDLL
601: NSTASVVCSL SFDAEEEHIA AAGISKKIKI FDFNAFMNES VGVQYPLVEM VSKSKLSCVC WNSYIKNYLA STDYDGVVQI WDAGTGQGFS QYTEHQKRAW
701: SVDFSPSDPT KFVSGSDDCS VKLWSVNEKR SLGTIWSPAN VCCVQFSAYS NHLLAFGSAD YKVYCYDLRY VKTPWCTLAG HEKTVSYVKF MDSETIVSAS
801: TDNSLKLWNL NKTGLSPGAC PLTYKGHTNQ KNFAGLSVLD GYIACGSETN EVYSYYKSLP MPMTSYKFGS VDPISGNECF DDNGQFVSSV CWRKKSNMLV
901: AANSTGNMTL LKLV
101: RRSHQNLEAF SQRLRAAGDN IINMNAPALS SSSFSQVILK SAMKGENQET PPDFVSDQDC KEIKLDNSNS PIPGYSSHKG HGDGNSLREF LISSYGKRER
201: RHGLSLFTQL VELVDSSHSQ GLFLMDLRPS LFALVPSKKL RYTGTFGKNN ADEDLNTKRP WTQESSIVGR GVLKKRKTDL HEPSPGNQLE APSTGRPFER
301: ISPVIDLNVV DAYNQDSCEL QQQNYGKSLG VASMTTRKQS MSTWLEEQWY TCPEQINGED SGEKSNIYAL GVLLFELLCH CESSEMHAAM MADLRYRILP
401: PAILSKYPEE AGFCLWLLHP EPSSRPTARE ILKSELISKN HDSAISTAAD EEMSELLLHF LSSLEKQKKK NATKLLQDIQ TLEDDIKEAE QRYSSNASLV
501: RSHGAMETRL QSSLMSNIHQ LEDAYFFMRS QMKLSNSACH SDKSLLKDRD RWSENQNENQ DTKTKGKSSD QVEVFFEGLC KFARYSKFET CGTIRSGDLL
601: NSTASVVCSL SFDAEEEHIA AAGISKKIKI FDFNAFMNES VGVQYPLVEM VSKSKLSCVC WNSYIKNYLA STDYDGVVQI WDAGTGQGFS QYTEHQKRAW
701: SVDFSPSDPT KFVSGSDDCS VKLWSVNEKR SLGTIWSPAN VCCVQFSAYS NHLLAFGSAD YKVYCYDLRY VKTPWCTLAG HEKTVSYVKF MDSETIVSAS
801: TDNSLKLWNL NKTGLSPGAC PLTYKGHTNQ KNFAGLSVLD GYIACGSETN EVYSYYKSLP MPMTSYKFGS VDPISGNECF DDNGQFVSSV CWRKKSNMLV
901: AANSTGNMTL LKLV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.