Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000420.1-P | Field mustard | nucleus | 99.22 | 92.97 |
| CDX95691 | Canola | nucleus | 88.91 | 86.87 |
| CDY42035 | Canola | nucleus | 80.52 | 73.14 |
| CDX80009 | Canola | nucleus | 80.96 | 73.03 |
| AT2G46340.2 | Thale cress | nucleus | 82.75 | 71.82 |
| KRH25904 | Soybean | mitochondrion | 6.94 | 55.86 |
| GSMUA_Achr11P... | Banana | cytosol | 40.09 | 43.45 |
| CDY19171 | Canola | cytosol | 11.65 | 41.27 |
| VIT_15s0046g01310.t01 | Wine grape | nucleus | 48.82 | 40.67 |
| PGSC0003DMT400049874 | Potato | nucleus | 45.58 | 40.14 |
| KRH06512 | Soybean | nucleus | 45.69 | 39.88 |
| CDY50512 | Canola | nucleus | 32.81 | 39.7 |
| Solyc10g011690.2.1 | Tomato | nucleus | 44.9 | 39.35 |
| KRH47949 | Soybean | nucleus | 45.24 | 39.03 |
| GSMUA_Achr1P28310_001 | Banana | nucleus | 44.57 | 39.02 |
| CDX86817 | Canola | nucleus | 41.1 | 37.87 |
| CDY40851 | Canola | nucleus | 41.66 | 37.84 |
| CDX98548 | Canola | nucleus, plastid | 32.36 | 36.4 |
| GSMUA_Achr8P05740_001 | Banana | nucleus | 43.34 | 36.1 |
| CDX97654 | Canola | nucleus, plastid | 32.14 | 36.1 |
| CDY20122 | Canola | nucleus | 31.8 | 36.04 |
| CDY21834 | Canola | nucleus, plastid | 31.91 | 36.03 |
| CDX79494 | Canola | cytosol | 4.14 | 35.92 |
| Os05t0571000-01 | Rice | cytosol | 45.24 | 35.31 |
| EES19971 | Sorghum | cytosol | 44.01 | 34.84 |
| Zm00001d039072_P005 | Maize | cytosol | 43.34 | 34.49 |
| Zm00001d009617_P017 | Maize | mitochondrion | 44.23 | 34.47 |
| CDX87159 | Canola | cytosol | 13.44 | 32.43 |
| CDY16865 | Canola | nucleus | 13.44 | 32.34 |
| TraesCS1D01G417600.1 | Wheat | cytosol | 44.79 | 31.45 |
| CDY32590 | Canola | cytosol | 12.43 | 31.36 |
| CDY38909 | Canola | cytosol | 12.32 | 31.25 |
| CDY12145 | Canola | nucleus | 22.73 | 30.03 |
| CDY52540 | Canola | nucleus | 22.73 | 29.99 |
| HORVU1Hr1G090080.3 | Barley | cytosol | 44.68 | 29.89 |
| CDY25880 | Canola | nucleus | 14.33 | 27.77 |
Protein Annotations
| MapMan:18.4.16 | MapMan:19.2.2.8.3.4.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.3.2 | GO:A0A078D1W4 | EnsemblPlants:CDX83371 |
| ProteinID:CDX83371 | ProteinID:CDX83371.1 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00138936001 | InterPro:IPR000719 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50011 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44218 | PANTHER:PTHR44218:SF3 | InterPro:Prot_kinase_dom | SMART:SM00320 |
| SUPFAM:SSF50978 | SUPFAM:SSF56112 | UniParc:UPI0004EF492D | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
BnaA03g21350D
Coordinates
chrLK031832:+:1229968..1233573
Molecular Weight (calculated)
99478.9 Da
IEP (calculated)
6.025
GRAVY (calculated)
-0.467
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVLIGEEA VESSNLQFKG RVDDVPCTGS SADMKNVVDD INKPPVEESV GASSKICVEE LRLVNNRIVN VDSSPPAFRL GDGDVDSHML SRIRQQLAGA
101: SSERLNYINR RSHQNLEAFS QRLRAAGDNS INMNAPALSS SSFLSAMKGE NQETPPDFVS GQDCQENKLD NSKSPIPGNS SHKGHGDGIS LREFLRSSYG
201: KRERRHGLSL FRQLVELVDS AHSQGLFLMD LRPSLFALVP SKKLRYTGTF GKNNGDEEVN RKRPGTQESS APSTGRPFER ISPVIDLNVV DAYNPDSCEL
301: QQQNYRKSLG VASMTRRKQS MSTWLEEQWY TCPEEINGED SGEKSNIYAL GVLLFELLCH CESSEMHAAM MADLRHRILP PAFLSKYPEE AGFCLWLLHP
401: EPSSRPTARE ILNSELISKN DSAISTAADE EMSELLLHFL SSLEKQKKKN ATKLLQDIQT LEDDIKEAEQ RYSSNASLRC TTSSGALFAP AANTDRLMMS
501: NLRQLEDAYF FMRSQMKLSN SAARSDKSLR WSENQNENQE TKTKEKSSDQ VEVFFEGLCK FARYSKFETC GTVRSGDLLN STASVVCSLS FDAEEEHIAA
601: AGISKKIKIF DFNAFMNESV GVQYPLVEMV SKSKLSCVCW NNYIKNYLAS TDYDGVVQIW DAGTGQGFSQ YTEHQKRAWS VDFSPSDPTK FVSGSDDCSV
701: KLWSVNEKRS LGTIWSPANV CCVQFSSYSN HLVAFGSADY KVYCYDLRYV RTPWCTLSGH EKTVSYVKFM DSETIVSAST DNSLKLWNLN KTGLSPGACP
801: LTYKGHTNQK NFVGLSVLDG YIACGSETNE VYSYYKSLPM PMTSYKFGAV DPISGNECFD DNAQFVSSVC WRKKSNMLVA ANSTGNMKLL KLV
101: SSERLNYINR RSHQNLEAFS QRLRAAGDNS INMNAPALSS SSFLSAMKGE NQETPPDFVS GQDCQENKLD NSKSPIPGNS SHKGHGDGIS LREFLRSSYG
201: KRERRHGLSL FRQLVELVDS AHSQGLFLMD LRPSLFALVP SKKLRYTGTF GKNNGDEEVN RKRPGTQESS APSTGRPFER ISPVIDLNVV DAYNPDSCEL
301: QQQNYRKSLG VASMTRRKQS MSTWLEEQWY TCPEEINGED SGEKSNIYAL GVLLFELLCH CESSEMHAAM MADLRHRILP PAFLSKYPEE AGFCLWLLHP
401: EPSSRPTARE ILNSELISKN DSAISTAADE EMSELLLHFL SSLEKQKKKN ATKLLQDIQT LEDDIKEAEQ RYSSNASLRC TTSSGALFAP AANTDRLMMS
501: NLRQLEDAYF FMRSQMKLSN SAARSDKSLR WSENQNENQE TKTKEKSSDQ VEVFFEGLCK FARYSKFETC GTVRSGDLLN STASVVCSLS FDAEEEHIAA
601: AGISKKIKIF DFNAFMNESV GVQYPLVEMV SKSKLSCVCW NNYIKNYLAS TDYDGVVQIW DAGTGQGFSQ YTEHQKRAWS VDFSPSDPTK FVSGSDDCSV
701: KLWSVNEKRS LGTIWSPANV CCVQFSSYSN HLVAFGSADY KVYCYDLRYV RTPWCTLSGH EKTVSYVKFM DSETIVSAST DNSLKLWNLN KTGLSPGACP
801: LTYKGHTNQK NFVGLSVLDG YIACGSETNE VYSYYKSLPM PMTSYKFGAV DPISGNECFD DNAQFVSSVC WRKKSNMLVA ANSTGNMKLL KLV
0001: MPVMERVAEE TVATNNIQLK ARVDDVPCNK LDARHNDMVI QSETANSDCP GSSAHRNVDL TKPPPPEEAA GAKLSVEELT LGNYRIVQGS NNTNVDSPRA
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
0101: GKFEHLYRLA RGSAFRAGDG DLDSQPRDMD QMLSRIRQQL AGAPSERQNL KPFMSRRSDQ NLEAFSERLR AAGENSIMNA PALISEGVQM KTPVSSSNFS
0201: QLLLKRAMKG KGVVGKNQET PPEFVSDQDL GSKEKKLDIS KSPTPHDVLP LKSSPKGNGM VSHGDGNHSK SSIGISLREF LRSSYAKREK RHGLCLFRQL
0301: VELVDSAHSK RLFLLDLRPS LFTLVPSKKL RYIGNFGKND LESDVDEDLN RRRPVVEESS SGGRDSKKRK MDLHLNSPGN QLQATSTGRP FKRKSPVIDL
0401: NMVDARNPDS CELQQQDYIK NLSVSSVSRK QSMSTWLEEQ WYTCPEEING EDIGEKSNIY ALGVLLFELL CHCESGEMHA AMMADLRHRI LPPTFLSKYP
0501: KEAGFCLWLL HPEPSSRPSA RDILKSELIC EDDSVKSTAA AEEISELLLH FLSSLEVQKK KKASKLLQDI QTLEDDIKEA ERRYSSNVSL VRSHGAIEKR
0601: VQSSPLDEHC TTSSALFVPT ANTDRLMSNI RQLEDAYFFM RSQINLSSSA ATARSDKTLK DRDRCSENQN ENQDMSTKGK SSDQLEVFFE GLCKFARYSK
0701: FETCGTIRSG DLLNSASVVC SLSFDPDEEH IAAAGISKKI KIFDFNAFMN ESVGVHYPLV EMVNKSKLSC VCWNSYIKNY LASTDYDGVV QIWDAGTGQG
0801: FSQYTEHQKR AWSVDFSPSD PTKFVSGSDD CSVKLWSINE KRSLGTIWSP ANVCCVQFSS YSNHLLAFGS ADYKVYCYDL RYVKTPWCTL AGHEKAVSYV
0901: KFMDSETIVS ASTDNSLKLW NLNKTNSSGL SPGACSLTYK GHTNQKNFVG LSVLDGYIAC GSETNEVYSY YKSLPMPMTS YKFGSVDPIS GNEYFDDNGQ
1001: FVSSVCWRKK SNMLVAANST GNMKLLKLV
Arabidopsis Description
SPA1SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.