Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 3
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d014990_P001 | Maize | cytosol | 68.41 | 81.73 |
TraesCS6B01G054100.1 | Wheat | plastid | 61.97 | 75.12 |
TraesCS6D01G045000.1 | Wheat | plastid | 61.37 | 74.75 |
TraesCS6A01G039200.1 | Wheat | plastid | 61.37 | 74.75 |
GSMUA_Achr9P23670_001 | Banana | cytosol | 27.77 | 53.08 |
Bra029131.1-P | Field mustard | cytosol | 34.61 | 50.0 |
CDY38909 | Canola | cytosol | 35.01 | 49.43 |
GSMUA_Achr4P11950_001 | Banana | mitochondrion | 29.58 | 49.33 |
CDY32590 | Canola | cytosol | 34.81 | 48.87 |
Bra026485.1-P | Field mustard | cytosol | 18.31 | 45.96 |
CDX87159 | Canola | cytosol | 34.0 | 45.68 |
AT5G23730.1 | Thale cress | nucleus | 33.6 | 45.38 |
CDY16865 | Canola | nucleus | 33.8 | 45.28 |
AT5G52250.1 | Thale cress | cytosol, plastid | 34.61 | 44.68 |
PGSC0003DMT400015453 | Potato | cytosol | 32.39 | 43.51 |
Solyc11g005190.1.1 | Tomato | cytosol | 31.19 | 43.06 |
VIT_16s0050g00020.t01 | Wine grape | cytosol | 36.42 | 23.51 |
KXG31183 | Sorghum | nucleus, plastid | 19.72 | 14.1 |
OQU87453 | Sorghum | cytosol | 19.92 | 12.89 |
EES19971 | Sorghum | cytosol | 20.52 | 9.04 |
Os12t0558133-00 | Rice | endoplasmic reticulum, extracellular | 0.4 | 3.45 |
Protein Annotations
Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A1Z5RL75 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | EnsemblPlants:OQU84205 | ProteinID:OQU84205 | ProteinID:OQU84205.1 |
PFAM:PF00400 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR45389 | SMART:SM00320 | EnsemblPlantsGene:SORBI_3004G011201 |
SUPFAM:SSF50978 | UniParc:UPI000B8B98B1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:928737..930406
Molecular Weight (calculated)
52035.4 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.337
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPSSPASS SRSSSAAAQE HRLPEEESQT LHHHNDQEVA SAIAAPFPPS SCEADHQAHD DKDAELSPPR CEWEFRLAAT VPTTALPGAS DAIGSVDFDP
101: TGRLLATGGI ARKIRMYDVA SMLLPLDDSA GARAGPAACI CVPAKLSSVR WRPGGGGDAS SSVVGCGDYD GVVTEYDVER GVASWERDEH AGRRVWSLDY
201: APGSAMAASG SDDRTAHVWD PRAPSGGWAT ARAGGAVLCV EFDPSGAPHL AVGSADRRAV VYDVRALGRG AVARMDGHAR AVTYVRWAGP GPARRVVTSA
301: ADGTHRLWEW SGGASAAAEV VVEAGAAAAA AREVRSYSGH ASARSFVGMG VWRGAGLVAS GSESNHVFVY DLRWAKPIWV HPFFASHGHG GAHGPVTTDA
401: AAAAAAGGFV SAVAWRQGSH NDGDLDGGAL VAGGSDGVLK VFTCRRRRET AGDDVIKKTR VQQQQQQKGQ LKYMFRLKLS EGRGEIKKGG QKMRDCD
101: TGRLLATGGI ARKIRMYDVA SMLLPLDDSA GARAGPAACI CVPAKLSSVR WRPGGGGDAS SSVVGCGDYD GVVTEYDVER GVASWERDEH AGRRVWSLDY
201: APGSAMAASG SDDRTAHVWD PRAPSGGWAT ARAGGAVLCV EFDPSGAPHL AVGSADRRAV VYDVRALGRG AVARMDGHAR AVTYVRWAGP GPARRVVTSA
301: ADGTHRLWEW SGGASAAAEV VVEAGAAAAA AREVRSYSGH ASARSFVGMG VWRGAGLVAS GSESNHVFVY DLRWAKPIWV HPFFASHGHG GAHGPVTTDA
401: AAAAAAGGFV SAVAWRQGSH NDGDLDGGAL VAGGSDGVLK VFTCRRRRET AGDDVIKKTR VQQQQQQKGQ LKYMFRLKLS EGRGEIKKGG QKMRDCD
001: MEALFCSEIP NNNIRSSIND LSSSSSYTWP MIMTSSSSSS SSPTIMNIEN IPRCDWDLSL SAVVSSASTG SDAIGAIEFD PTGEIIATGG IARKIRSYRL
101: SSLLESRDDH VTASESYICT PAKLSSLKWR PDFSGRVIGS GDYDGVVTEY DVEKQVPVSE RDEHGGRRIW SVDYTLYNGS LIGASGSDDG TVQMWDPRNG
201: GTLEETVRPG GGAAICSVEF DPFGGSSIAV GCADRNAYVY DIRRLVDPLI VLDGHTKTVT YARFMDSHTI VTGSTDGSLK QWDIDNGRRV VRTYRGHVNS
301: RNFVGLSVWR HGGLVVSGSE NNQVFVYDKR WEEPVWVCGL GHTNRFGSDR RFVSSVCLRQ VDEDWCTLVA GGSDGALEIF SGKQS
101: SSLLESRDDH VTASESYICT PAKLSSLKWR PDFSGRVIGS GDYDGVVTEY DVEKQVPVSE RDEHGGRRIW SVDYTLYNGS LIGASGSDDG TVQMWDPRNG
201: GTLEETVRPG GGAAICSVEF DPFGGSSIAV GCADRNAYVY DIRRLVDPLI VLDGHTKTVT YARFMDSHTI VTGSTDGSLK QWDIDNGRRV VRTYRGHVNS
301: RNFVGLSVWR HGGLVVSGSE NNQVFVYDKR WEEPVWVCGL GHTNRFGSDR RFVSSVCLRQ VDEDWCTLVA GGSDGALEIF SGKQS
Arabidopsis Description
RUP1WD repeat-containing protein RUP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTJ6]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.