Factsheet for Os12t0558133-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	secretory
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0725800-01	Rice	nucleus	87.93	8.12
Os05t0571000-01	Rice	cytosol	50.0	2.53
GSMUA_Achr9P23670_001	Banana	cytosol	6.9	1.54
GSMUA_Achr4P11950_001	Banana	mitochondrion	5.17	1.01
TraesCS6D01G045000.1	Wheat	plastid	6.9	0.98
TraesCS6A01G039200.1	Wheat	plastid	6.9	0.98
TraesCS6B01G054100.1	Wheat	plastid	6.9	0.98
Os02t0771100-01	Rice	nucleus	10.34	0.88
AT5G23730.1	Thale cress	nucleus	3.45	0.54
AT5G52250.1	Thale cress	cytosol, plastid	3.45	0.52
OQU84205	Sorghum	plastid	3.45	0.4
VIT_16s0050g00020.t01	Wine grape	cytosol	5.17	0.39
Solyc11g005190.1.1	Tomato	cytosol	1.72	0.28
PGSC0003DMT400015453	Potato	cytosol	1.72	0.27
CDX87159	Canola	cytosol	1.72	0.27
CDY16865	Canola	nucleus	1.72	0.27
CDY38909	Canola	cytosol	0.0	0.0
CDY32590	Canola	cytosol	0.0	0.0
Bra029131.1-P	Field mustard	cytosol	0.0	0.0
Bra026485.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d014990_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os12t0558133-00	EnsemblPlantsGene:Os12g0558133	PANTHER:PTHR44218	PANTHER:PTHR44218:SF1	ProteinID:BAT17618.1	SEG:seg
UniParc:UPI000393A2AC	UniProt:A0A0N7KU73	MapMan:35.2	:	:	:

Description

Similar to SPA4 (SPA1-RELATED 4); protein binding / signal transducer. (Os12t0558133-00)

Coordinates

chr12:+:22736219..22736862

Molecular Weight (calculated)

6795.5 Da

IEP (calculated)

5.549

GRAVY (calculated)

0.245

Length

58 amino acids

Sequence
(BLAST)

1: HVYVGVLLFE LFYTFETMEE KMRAMANLPQ CVLPPQLLLK WPKEASFCQL LMHPVPDT

Best Arabidopsis Sequence Match ( AT1G53090.5 )
(BLAST)

001: MKGSSESSSR GLNNTSGVSE FCTDGSKSLS HIDYVRSLLG SHKEANLGGL DDDSIVRALE CEDVSLRQWL DNPDRSVDAF ECFHVFRQIV EIVNAAHSQG
101: IVVHNVRPSC FVMSSFNNVS FIESASCSDS GSDEDATTKS REIGSSRQEE ILSERRSKQQ EEVKKQPFPM KQILAMEMSW YTSHEEDNGS LCNCASDIYR
201: LGVLLFELFC PVSSREEKSR TMSSLRHRVL PPQILLNWPK EASFCLWLLH PEPSCRPSMS ELLQSEFINE PRENLEEREA AMELRDRIEE QELLLEFLFL
301: IQQRKQEAAD KLQDTISLLS SDIDQVVKRQ LVLQQKGRDV RSFLASRKRI RQGAETTAAE EENDDNSIDE ESKLDDTLES TLLESSRLMR NLKKLESVYF
401: ATRYRQIKAA TAAEKPLARY YSALSCNGRS SEKSSMSQPS KDPINDSRQG GWIDPFLEGL CKYLSFSKLR VKADLKQGDL LNSSNLVCAI GFDRDGEFFA
501: TAGVNKKIKI FECESIIKDG RDIHYPVVEL ASRSKLSGIC WNSYIKSQVA SSNFEGVVQV WDVARNQLVT EMKEHEKRVW SIDYSSADPT LLASGSDDGS
601: VKLWSINQAN FETKPKRG

Arabidopsis Description

SPA4SPA4 [Source:UniProtKB/TrEMBL;Acc:A0A178WBA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.