Factsheet for Os02t0771100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0725800-01
Os02t0554100-01
Os02t0573200-01
Os02t0606200-01
Os02t0625000-01
Os02t0646200-01
Os02t0771100-01
Os03t0309200-01
Os04t0435700-01
Os04t0452100-02
Os04t0493000-01
Os04t0532800-01
Os04t0540200-01
Os06t0275000-01
Os06t0713000-01
Os07t0577400-01
Os08t0119000-01
Os08t0500000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32950.1	Os02t0625000-01	AT1G04400.1	11509693
AT2G32950.1	Os02t0606200-01	AT1G06040.1	11226162
AT2G32950.1	Os04t0493000-01	AT1G06040.1	11226162
AT2G32950.1	Os01t0725800-01	AT1G53090.1	12887588
AT2G32950.1	Os01t0725800-01	AT1G53090.1	18812498
AT2G32950.1	Os01t0725800-01	AT1G53090.1	21798944
AT2G32950.1	Os02t0646200-01	AT1G75540.1	17965270
AT2G32950.1	Os04t0540200-01	AT1G75540.1	17965270
AT2G32950.1	Os06t0713000-01	AT1G75540.1	17965270
AT2G32950.1	Os03t0309200-01	AT2G18790.1	11752373
AT2G32950.1	Os06t0275000-01	AT2G24790.1	16339850
AT2G32950.1	Os02t0606200-01	AT2G31380.1	11226162
AT2G32950.1	Os04t0493000-01	AT2G31380.1	11226162
AT2G32950.1	Os02t0771100-01	AT2G32950.1	18812498
AT2G32950.1	Os02t0771100-01	AT2G32950.1	9755158
AT2G32950.1	Os07t0577400-01	AT3G13550.1	11877375
AT2G32950.1	Os07t0577400-01	AT3G13550.1	16844902
AT2G32950.1	Os02t0573200-01	AT4G08920.1	11509693
AT2G32950.1	Os04t0452100-02	AT4G08920.1	11509693
AT2G32950.1	Os02t0573200-01	AT4G08920.1	11752373
AT2G32950.1	Os04t0452100-02	AT4G08920.1	11752373
AT2G32950.1	Os04t0532800-01	AT4G25560.1	12827204
AT2G32950.1	Os08t0119000-01	AT5G14250.1	14597662
AT2G32950.1	Os08t0500000-01	AT5G56280.1	14597662
AT2G32950.1	Os02t0554100-01	AT5G63860.1	19165148
AT2G32950.1	Os04t0435700-01	AT5G63860.1	19165148

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052138_P004	Maize	nucleus	89.78	89.65
KXG31183	Sorghum	nucleus, plastid	90.95	89.64
Zm00001d018207_P001	Maize	nucleus	90.51	89.47
TraesCS6B01G356400.1	Wheat	nucleus	87.59	86.58
TraesCS6D01G305800.1	Wheat	nucleus	88.18	86.41
TraesCS6A01G326100.1	Wheat	nucleus	87.74	85.86
VIT_10s0523g00030.t01	Wine grape	nucleus	69.05	78.57
GSMUA_Achr3P20130_001	Banana	nucleus	75.77	76.78
Bra021818.1-P	Field mustard	cytosol	13.14	75.63
GSMUA_AchrUn_...	Banana	nucleus	69.64	74.65
CDY19171	Canola	cytosol	26.57	72.22
Solyc12g005950.1.1	Tomato	nucleus	70.07	70.9
KRH73341	Soybean	nucleus	69.05	70.7
AT2G32950.1	Thale cress	nucleus	69.49	70.52
KRH14801	Soybean	nucleus	69.34	70.37
CDY12145	Canola	nucleus	69.05	69.97
CDY52540	Canola	nucleus	69.05	69.87
PGSC0003DMT400036075	Potato	nucleus	66.57	69.83
Bra005541.1-P	Field mustard	nucleus	68.03	69.66
VIT_12s0059g01420.t01	Wine grape	nucleus	67.74	68.64
Solyc11g011980.1.1	Tomato	nucleus	67.01	68.3
PGSC0003DMT400034706	Potato	nucleus	67.15	66.76
CDX79494	Canola	cytosol	8.91	59.22
Os01t0725800-01	Rice	nucleus	20.44	22.29
Os05t0571000-01	Rice	cytosol	32.26	19.32
Os12t0558133-00	Rice	endoplasmic reticulum, extracellular	0.88	10.34

Protein Annotations

MapMan:18.4.16	MapMan:19.2.2.8.3.4.1	Gene3D:2.130.10.10	MapMan:26.1.1.3.3.1	Gene3D:3.30.40.10	EntrezGene:4330868
EMBL:AK111614	ProteinID:BAD16846.1	ProteinID:BAD16847.1	ProteinID:BAF10168.1	ProteinID:BAK26796.1	ProteinID:BAS81115.1
ProteinID:BAS81116.1	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006464	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009628	GO:GO:0009640
GO:GO:0009641	GO:GO:0009649	GO:GO:0009791	GO:GO:0009987	GO:GO:0010119	GO:GO:0016567
GO:GO:0016604	GO:GO:0016740	GO:GO:0016874	GO:GO:0019538	GO:GO:0042802	GO:GO:0046283
GO:GO:0046872	GO:GO:0048573	GO:GO:0061630	InterPro:IPR001680	InterPro:IPR001841	InterPro:IPR013083
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os02g0771100	EnsemblPlants:Os02t0771100-01	PFAM:PF00400	PFAM:PF13923
ScanProsite:PS00518	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50089	PFscan:PS50294	PANTHER:PTHR44080
PANTHER:PTHR44080:SF2	UniProt:Q6ZHH4	SMART:SM00184	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF57850
UniParc:UPI000009CB37	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
RefSeq:XP_015627602.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:

Description

PETER PAN SYNDROMESimilar to COP1 (Fragment). (Os02t0771100-01);Similar to CopI. (Os02t0771100-02);Similar to COP1 (Fragment). (Os02t0771100-03)

Coordinates

chr2:-:32528143..32533583

Molecular Weight (calculated)

76417.6 Da

IEP (calculated)

7.157

GRAVY (calculated)

-0.408

Length

685 amino acids

Sequence
(BLAST)

001: MGDSTVAGAL VPSVPKQEQA PSGDASTAAL AVAGEGEEDA GARASAGGNG EAAADRDLLC PICMAVIKDA FLTACGHSFC YMCIVTHLSH KSDCPCCGNY
101: LTKAQLYPNF LLDKVLKKMS ARQIAKTASP IDQFRYALQQ GNDMAVKELD SLMTLIAEKK RHMEQQESET NMQILLVFLH CLRKQKLEEL NEIQTDLQYI
201: KEDISAVERH RLELYRTKER YSMKLRMLLD EPAASKMWPS PMDKPSGLFP PNSRGPLSTS NPGGLQNKKL DLKGQISHQG FQRRDVLTCS DPPSAPIQSG
301: NVIARKRRVQ AQFNELQEYY LQRRRTGAQS RRLEERDIVT INKEGYHAGL EDFQSVLTTF TRYSRLRVIA ELRHGDLFHS ANIVSSIEFD RDDELFATAG
401: VSKRIKVFEF STVVNEPSDV HCPVVEMATR SKLSCLSWNK YSKNVIASSD YEGIVTVWDV QTRQSVMEYE EHEKRAWSVD FSRTEPSMLV SGSDDCKVKV
501: WCTKQEASAI NIDMKANICS VKYNPGSSHY VAVGSADHHI HYFDLRNPSA PVHVFGGHKK AVSYVKFLST NELASASTDS TLRLWDVKEN CPVRTFRGHK
601: NEKNFVGLSV NNEYIACGSE TNEVFVYHKA ISKPAANHRF VSSDLDDADD DPGSYFISAV CWKSDSPTML TANSQGTIKV LVLAP

Best Arabidopsis Sequence Match ( AT2G32950.1 )
(BLAST)

001: MEEISTDPVV PAVKPDPRTS SVGEGANRHE NDDGGSGGSE IGAPDLDKDL LCPICMQIIK DAFLTACGHS FCYMCIITHL RNKSDCPCCS QHLTNNQLYP
101: NFLLDKLLKK TSARHVSKTA SPLDQFREAL QRGCDVSIKE VDNLLTLLAE RKRKMEQEEA ERNMQILLDF LHCLRKQKVD ELNEVQTDLQ YIKEDINAVE
201: RHRIDLYRAR DRYSVKLRML GDDPSTRNAW PHEKNQIGFN SNSLSIRGGN FVGNYQNKKV EGKAQGSSHG LPKKDALSGS DSQSLNQSTV SMARKKRIHA
301: QFNDLQECYL QKRRQLADQP NSKQENDKSV VRREGYSNGL ADFQSVLTTF TRYSRLRVIA EIRHGDIFHS ANIVSSIEFD RDDELFATAG VSRCIKVFDF
401: SSVVNEPADM QCPIVEMSTR SKLSCLSWNK HEKNHIASSD YEGIVTVWDV TTRQSLMEYE EHEKRAWSVD FSRTEPSMLV SGSDDCKVKV WCTRQEASVI
501: NIDMKANICC VKYNPGSSNY IAVGSADHHI HYYDLRNISQ PLHVFSGHKK AVSYVKFLSN NELASASTDS TLRLWDVKDN LPVRTFRGHT NEKNFVGLTV
601: NSEYLACGSE TNEVYVYHKE ITRPVTSHRF GSPDMDDAEE EAGSYFISAV CWKSDSPTML TANSQGTIKV LVLAA

Arabidopsis Description

COP1FUS1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.