Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0771100-01 | |
| Os03t0854800-03 | |
| Os10t0577800-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G348900.1 | Wheat | nucleus | 75.0 | 54.33 |
| TraesCS2D01G347300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 75.0 | 53.49 |
| TraesCS2B01G367300.2 | Wheat | nucleus | 74.46 | 53.1 |
| EES12431 | Sorghum | nucleus | 75.54 | 51.87 |
| TraesCS2A01G366100.2 | Wheat | nucleus | 73.37 | 51.33 |
| Os02t0606200-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 60.87 | 41.33 |
| GSMUA_Achr9P02360_001 | Banana | cytosol | 46.74 | 36.13 |
| VIT_05s0102g00750.t01 | Wine grape | nucleus | 43.48 | 33.47 |
| GSMUA_Achr6P21320_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 46.2 | 33.46 |
| KRH29616 | Soybean | nucleus | 42.93 | 33.19 |
| KRH24617 | Soybean | nucleus | 42.93 | 33.19 |
| PGSC0003DMT400069498 | Potato | nucleus | 41.85 | 33.05 |
| Solyc06g073180.2.1 | Tomato | nucleus | 41.3 | 32.62 |
| KRH23214 | Soybean | nucleus | 41.85 | 32.22 |
| CDX86539 | Canola | nucleus | 39.13 | 29.88 |
| Bra030635.1-P | Field mustard | nucleus | 38.59 | 29.46 |
| Bra015469.1-P | Field mustard | nucleus | 38.59 | 29.22 |
| CDY15558 | Canola | nucleus | 38.04 | 29.17 |
| CDY06194 | Canola | nucleus | 36.41 | 28.63 |
| AT1G06040.1 | Thale cress | nucleus | 38.59 | 28.63 |
| Bra032441.1-P | Field mustard | nucleus | 35.87 | 28.21 |
| CDY09992 | Canola | nucleus | 35.87 | 28.09 |
| CDY19093 | Canola | nucleus | 36.41 | 28.03 |
| Bra021734.1-P | Field mustard | nucleus | 35.87 | 27.5 |
| CDY15382 | Canola | nucleus | 35.87 | 27.27 |
| CDY56613 | Canola | nucleus | 35.87 | 27.16 |
| Bra018249.1-P | Field mustard | nucleus | 35.33 | 26.75 |
| CDY10800 | Canola | nucleus | 34.78 | 26.34 |
| AT2G31380.1 | Thale cress | nucleus | 33.15 | 25.63 |
| KRH10122 | Soybean | nucleus | 42.39 | 19.9 |
| Os04t0540200-01 | Rice | nucleus | 20.65 | 15.2 |
| Os12t0209200-01 | Rice | cytosol | 15.22 | 13.33 |
| Os06t0152200-01 | Rice | nucleus | 25.0 | 12.78 |
| Os01t0202500-01 | Rice | cytosol, nucleus | 24.46 | 12.71 |
| Os02t0646200-01 | Rice | nucleus | 18.48 | 12.64 |
| Os05t0204600-01 | Rice | cytosol, nucleus, plastid | 23.91 | 11.64 |
| Os06t0713000-01 | Rice | nucleus | 18.48 | 11.04 |
| Os09t0527900-01 | Rice | cytosol | 10.33 | 9.0 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0P0WC73 | ProteinID:BAS89861.1 | GO:GO:0000989 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009640 | GO:GO:0009791 | GO:GO:0009987 | EnsemblPlantsGene:Os04g0493000 | EnsemblPlants:Os04t0493000-01 | PANTHER:PTHR31832 |
| PANTHER:PTHR31832:SF29 | UniParc:UPI000393BADC | SEG:seg | : | : | : |
Description
B-box-containing protein 11Similar to H0425E08.14 protein. (Os04t0493000-01)
Coordinates
chr4:-:24648004..24648863
Molecular Weight (calculated)
19392.6 Da
IEP (calculated)
4.683
GRAVY (calculated)
-0.353
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: RALFCRDCDE PIHVPGTLSG NHQRYLTTGI RVGFSSVCSA NADHLPPPAP KGNSKPPASG IAAAAAPKPA VSAAAQEVPS SPFLPPSGWA VEDLLQLSDY
101: ESSDKKGSPI GFKDLEWLDD IDLFHVQSPA KGGSTAAEVP ELFASPQPAS NMGLYKASGA RQSKKPRVEI PDDDEDFFIV PDLG
101: ESSDKKGSPI GFKDLEWLDD IDLFHVQSPA KGGSTAAEVP ELFASPQPAS NMGLYKASGA RQSKKPRVEI PDDDEDFFIV PDLG
001: MKIQCDVCEK APATVICCAD EAALCPQCDI EIHAANKLAS KHQRLHLNSL STKFPRCDIC QEKAAFIFCV EDRALLCRDC DESIHVANSR SANHQRFLAT
101: GIKVALTSTI CSKEIEKNQP EPSNNQQKAN QIPAKSTSQQ QQQPSSATPL PWAVDDFFHF SDIESTDKKG QLDLGAGELD WFSDMGFFGD QINDKALPAA
201: EVPELSVSHL GHVHSYKPMK SNVSHKKPRF ETRYDDDDEE HFIVPDLG
101: GIKVALTSTI CSKEIEKNQP EPSNNQQKAN QIPAKSTSQQ QQQPSSATPL PWAVDDFFHF SDIESTDKKG QLDLGAGELD WFSDMGFFGD QINDKALPAA
201: EVPELSVSHL GHVHSYKPMK SNVSHKKPRF ETRYDDDDEE HFIVPDLG
Arabidopsis Description
BBX24B-box zinc finger protein 24 [Source:UniProtKB/Swiss-Prot;Acc:Q96288]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.