Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97079 | Sorghum | cytosol | 89.1 | 89.1 |
| Zm00001d021278_P001 | Maize | cytosol | 86.26 | 88.35 |
| Solyc02g084420.2.1 | Tomato | cytosol | 34.6 | 82.95 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 81.52 | 81.52 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 80.57 | 80.57 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 80.57 | 80.57 |
| GSMUA_Achr10P... | Banana | cytosol | 71.56 | 72.6 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 60.19 | 69.02 |
| CDX82018 | Canola | cytosol | 58.77 | 66.31 |
| Bra031180.1-P | Field mustard | cytosol | 58.29 | 65.43 |
| PGSC0003DMT400009328 | Potato | cytosol | 56.4 | 65.38 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 64.45 | 64.76 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 51.18 | 62.79 |
| Bra010718.1-P | Field mustard | cytosol | 53.08 | 62.22 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 80.57 | 61.82 |
| CDX72726 | Canola | cytosol | 52.13 | 61.45 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.92 | 61.14 |
| CDY12111 | Canola | cytosol | 52.13 | 61.11 |
| CDX90301 | Canola | cytosol | 52.13 | 61.11 |
| KRH29344 | Soybean | nucleus | 61.14 | 60.85 |
| Bra033588.1-P | Field mustard | cytosol | 52.13 | 60.44 |
| KRH24373 | Soybean | nucleus | 60.19 | 59.91 |
| PGSC0003DMT400008044 | Potato | cytosol | 60.19 | 59.91 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 66.35 | 57.85 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.92 | 56.19 |
| CDY22402 | Canola | plastid | 42.65 | 55.9 |
| Zm00001d006198_P001 | Maize | cytosol | 66.82 | 55.51 |
| Solyc01g110370.2.1 | Tomato | cytosol | 59.24 | 51.87 |
| AT4G38960.3 | Thale cress | cytosol | 54.03 | 50.44 |
| Os12t0209200-01 | Rice | cytosol | 24.17 | 24.29 |
| Os04t0540200-01 | Rice | nucleus | 27.01 | 22.8 |
| Os02t0646200-01 | Rice | nucleus | 25.59 | 20.07 |
| Os02t0606200-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.59 | 19.93 |
| Os06t0713000-01 | Rice | nucleus | 25.12 | 17.21 |
| Os06t0152200-01 | Rice | nucleus | 27.49 | 16.11 |
| Os01t0202500-01 | Rice | cytosol, nucleus | 27.01 | 16.1 |
| Os05t0204600-01 | Rice | cytosol, nucleus, plastid | 27.49 | 15.34 |
| Os04t0493000-01 | Rice | cytosol | 9.0 | 10.33 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | EntrezGene:4347644 | EMBL:AK122172 | ProteinID:BAD46368.1 | ProteinID:BAF25647.1 |
| ProteinID:BAT09066.1 | ProteinID:EEE70088.1 | GO:GO:0000989 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 |
| GO:GO:0009791 | GO:GO:0009987 | InterPro:IPR000315 | EnsemblPlantsGene:Os09g0527900 | EnsemblPlants:Os09t0527900-01 | PFAM:PF00643 |
| PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF5 | UniProt:Q651Z9 | SMART:SM00336 | UniParc:UPI000043A558 |
| RefSeq:XP_015651327.1 | InterPro:Znf_B-box | : | : | : | : |
Description
B-box-containing protein 29, DOUBLE B-BOX zinc finger gene 1, DOUBLE B-BOX 1Similar to Hd1-like protein. (Os09t0527900-01);Hypothetical conserved gene. (Os09t0527900-02)
Coordinates
chr9:-:20646418..20649984
Molecular Weight (calculated)
23367.5 Da
IEP (calculated)
6.332
GRAVY (calculated)
-0.685
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTICDVCES APAVLFCVAD EAALCRSCDE KVHMCNKLAR RHVRVGLADP NKVQRCDICE NAPAFFYCEI DGTSLCLSCD MTVHVGGKRT HGRYLLLRQR
101: VEFPGDKPGH MDDVAMQQKD PENRTDQKKA PHSVTKEQMA NHHNVSDDPA SDGNCDDQGN IDSKMIDLNM RPVRTHGQGS NSQTQGVDVS VNNHDSPGVV
201: PTCNFEREAN K
101: VEFPGDKPGH MDDVAMQQKD PENRTDQKKA PHSVTKEQMA NHHNVSDDPA SDGNCDDQGN IDSKMIDLNM RPVRTHGQGS NSQTQGVDVS VNNHDSPGVV
201: PTCNFEREAN K
001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLAEP SNAPCCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRFLLLRQR
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
Arabidopsis Description
B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.