Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97079 | Sorghum | cytosol | 94.66 | 92.42 |
| Os09t0527900-01 | Rice | cytosol | 88.35 | 86.26 |
| Solyc02g084420.2.1 | Tomato | cytosol | 36.41 | 85.23 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 80.58 | 78.67 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 80.58 | 78.67 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 80.1 | 78.2 |
| GSMUA_Achr10P... | Banana | cytosol | 71.84 | 71.15 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 60.19 | 67.39 |
| PGSC0003DMT400009328 | Potato | cytosol | 57.77 | 65.38 |
| CDX82018 | Canola | cytosol | 57.28 | 63.1 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 63.59 | 62.38 |
| Bra031180.1-P | Field mustard | cytosol | 56.8 | 62.23 |
| Bra010718.1-P | Field mustard | cytosol | 53.4 | 61.11 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 50.97 | 61.05 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 56.8 | 60.62 |
| CDX90301 | Canola | cytosol | 52.43 | 60.0 |
| CDY12111 | Canola | cytosol | 52.43 | 60.0 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 80.1 | 60.0 |
| CDX72726 | Canola | cytosol | 51.94 | 59.78 |
| Bra033588.1-P | Field mustard | cytosol | 51.94 | 58.79 |
| PGSC0003DMT400008044 | Potato | cytosol | 60.19 | 58.49 |
| KRH29344 | Soybean | nucleus | 59.22 | 57.55 |
| Zm00001d006198_P001 | Maize | cytosol | 70.39 | 57.09 |
| KRH24373 | Soybean | nucleus | 58.74 | 57.08 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 66.5 | 56.61 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 56.8 | 55.71 |
| CDY22402 | Canola | plastid | 41.75 | 53.42 |
| Solyc01g110370.2.1 | Tomato | cytosol | 59.22 | 50.62 |
| AT4G38960.3 | Thale cress | cytosol | 53.88 | 49.12 |
| Zm00001d017412_P001 | Maize | nucleus | 21.84 | 31.69 |
| Zm00001d051018_P002 | Maize | extracellular | 27.18 | 22.13 |
| Zm00001d025957_P001 | Maize | nucleus | 26.7 | 21.48 |
| Zm00001d002806_P001 | Maize | nucleus | 26.7 | 21.32 |
| Zm00001d051309_P001 | Maize | nucleus | 26.21 | 19.49 |
| Zm00001d037735_P001 | Maize | cytosol | 28.64 | 18.32 |
| Zm00001d039437_P001 | Maize | nucleus | 30.58 | 17.55 |
| Zm00001d036418_P001 | Maize | nucleus | 21.36 | 16.36 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 26.7 | 15.49 |
| Zm00001d036214_P001 | Maize | nucleus | 28.64 | 15.29 |
| Zm00001d045323_P004 | Maize | nucleus | 28.16 | 13.74 |
| Zm00001d010093_P001 | Maize | nucleus | 5.83 | 6.03 |
Protein Annotations
| EntrezGene:100273363 | MapMan:15.5.1.1 | Gene3D:3.30.40.200 | UniProt:B4FUZ0 | EMBL:BT040928 | EMBL:EU955839 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 |
| InterPro:IPR000315 | EMBL:KJ727936 | ProteinID:ONM56698.1 | PFAM:PF00643 | PFscan:PS50119 | PANTHER:PTHR31832 |
| PANTHER:PTHR31832:SF5 | SMART:SM00336 | UniParc:UPI00017B7FA0 | EnsemblPlantsGene:Zm00001d021278 | EnsemblPlants:Zm00001d021278_P001 | EnsemblPlants:Zm00001d021278_T001 |
| InterPro:Znf_B-box | : | : | : | : | : |
Description
double B-box zinc finger protein10B-box zinc finger protein 19
Coordinates
chr7:+:147632776..147636889
Molecular Weight (calculated)
22717.6 Da
IEP (calculated)
5.530
GRAVY (calculated)
-0.745
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTICDVCES APAVLFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLADP NKLVRCDICE NSPAFFYCEI DGTSLCLSCD MTVHVGGKRT HGRYLLLRQR
101: VEFPGDKPGH MDDVPMEIQD PENQRDQKKP PKEQTANHHN GDDPATDGNC DDQGNIDSKM IDLNMRPVRT HGQESNSQTQ GVGLSVNNHD SPGVVPTSNS
201: ERDTSK
101: VEFPGDKPGH MDDVPMEIQD PENQRDQKKP PKEQTANHHN GDDPATDGNC DDQGNIDSKM IDLNMRPVRT HGQESNSQTQ GVGLSVNNHD SPGVVPTSNS
201: ERDTSK
001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLAEP SNAPCCDICE NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRFLLLRQR
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
101: IEFPGDKPKE NNTRDNLQNQ RVSTNGNGEA NGKIDDEMID LNANPQRVHE PSSNNNGIDV NNENNHEPAG LVPVGPFKRE SEK
Arabidopsis Description
B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.