Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045323_P004 | Maize | nucleus | 97.99 | 46.21 |
| Zm00001d036214_P001 | Maize | nucleus | 85.43 | 44.04 |
| Zm00001d037735_P001 | Maize | cytosol | 27.14 | 16.77 |
| Zm00001d039437_P001 | Maize | nucleus | 30.15 | 16.71 |
| Zm00001d051018_P002 | Maize | extracellular | 10.05 | 7.91 |
| Zm00001d025957_P001 | Maize | nucleus | 10.05 | 7.81 |
| Zm00001d002806_P001 | Maize | nucleus | 9.05 | 6.98 |
| Zm00001d051309_P001 | Maize | nucleus | 8.54 | 6.14 |
| Zm00001d021278_P001 | Maize | cytosol | 6.03 | 5.83 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 10.05 | 5.63 |
| Zm00001d036418_P001 | Maize | nucleus | 7.04 | 5.2 |
| Zm00001d006198_P001 | Maize | cytosol | 5.03 | 3.94 |
| Zm00001d017412_P001 | Maize | nucleus | 1.51 | 2.11 |
Protein Annotations
| EnsemblPlants:Zm00001d010093_P001 | EnsemblPlants:Zm00001d010093_T001 | EnsemblPlantsGene:Zm00001d010093 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF32 | ProteinID:AQK93416.1 |
| SEG:seg | UniParc:UPI000842988C | UniProt:A0A1D6FP58 | MapMan:35.2 | : | : |
Description
B-box zinc finger protein 22
Coordinates
chr8:+:99085952..99087440
Molecular Weight (calculated)
21777.0 Da
IEP (calculated)
4.227
GRAVY (calculated)
-0.552
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNSTIRSVE SPPKYISEES PTLLQSSQTT TVFSNQINGN SDGAYHLSFS GGNVTDSLPD WPVDEFFSNS EYGPNFGFSE NELESDILSG IYMKKGDNAK
101: LGGAGGSPQC RLAEGSVAEE LLGQVPGLIT DEYMSRVPEN SWTVPEVPSP PTASGLNWHG NLCFPAYDST MFVPEITSLQ NSESHFTVPS SFKRRRREY
101: LGGAGGSPQC RLAEGSVAEE LLGQVPGLIT DEYMSRVPEN SWTVPEVPSP PTASGLNWHG NLCFPAYDST MFVPEITSLQ NSESHFTVPS SFKRRRREY
001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
Arabidopsis Description
LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.