Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021278_P001 | Maize | cytosol | 57.09 | 70.39 |
| EER97079 | Sorghum | cytosol | 57.48 | 69.19 |
| Os09t0527900-01 | Rice | cytosol | 55.51 | 66.82 |
| Solyc02g084420.2.1 | Tomato | cytosol | 22.05 | 63.64 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 52.76 | 63.51 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 52.36 | 63.03 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 52.36 | 63.03 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 42.13 | 58.15 |
| GSMUA_Achr10P... | Banana | cytosol | 46.46 | 56.73 |
| PGSC0003DMT400009328 | Potato | cytosol | 38.98 | 54.4 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 44.88 | 54.29 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 36.61 | 54.07 |
| Bra031180.1-P | Field mustard | cytosol | 39.76 | 53.72 |
| CDX82018 | Canola | cytosol | 39.37 | 53.48 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 39.76 | 52.33 |
| CDY22402 | Canola | plastid | 32.68 | 51.55 |
| Bra010718.1-P | Field mustard | cytosol | 36.22 | 51.11 |
| CDX90301 | Canola | cytosol | 35.83 | 50.56 |
| CDY12111 | Canola | cytosol | 35.43 | 50.0 |
| CDX72726 | Canola | cytosol | 35.04 | 49.72 |
| Bra033588.1-P | Field mustard | cytosol | 35.04 | 48.9 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 52.36 | 48.36 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 39.76 | 48.1 |
| KRH24373 | Soybean | nucleus | 39.76 | 47.64 |
| KRH29344 | Soybean | nucleus | 39.76 | 47.64 |
| PGSC0003DMT400008044 | Potato | cytosol | 39.37 | 47.17 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 41.73 | 43.8 |
| AT4G38960.3 | Thale cress | cytosol | 37.01 | 41.59 |
| Solyc01g110370.2.1 | Tomato | cytosol | 38.58 | 40.66 |
| Zm00001d017412_P001 | Maize | nucleus | 14.17 | 25.35 |
| Zm00001d051018_P002 | Maize | extracellular | 18.5 | 18.58 |
| Zm00001d002806_P001 | Maize | nucleus | 18.11 | 17.83 |
| Zm00001d025957_P001 | Maize | nucleus | 17.72 | 17.58 |
| Zm00001d051309_P001 | Maize | nucleus | 17.32 | 15.88 |
| Zm00001d037735_P001 | Maize | cytosol | 19.29 | 15.22 |
| Zm00001d039437_P001 | Maize | nucleus | 20.47 | 14.48 |
| Zm00001d036214_P001 | Maize | nucleus | 19.68 | 12.95 |
| Zm00001d036418_P001 | Maize | nucleus | 13.39 | 12.64 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 16.93 | 12.11 |
| Zm00001d045323_P004 | Maize | nucleus | 19.68 | 11.85 |
| Zm00001d010093_P001 | Maize | nucleus | 3.94 | 5.03 |
Protein Annotations
| EnsemblPlants:Zm00001d006198_P001 | EnsemblPlants:Zm00001d006198_T001 | EnsemblPlantsGene:Zm00001d006198 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31832 |
| PANTHER:PTHR31832:SF5 | PFAM:PF00643 | PFscan:PS50119 | ProteinID:ONM23054.1 | SEG:seg | SMART:SM00336 |
| UniParc:UPI000844B080 | UniProt:A0A1D6ETP7 | MapMan:15.5.1.1 | : | : | : |
Description
B-box zinc finger protein 19
Coordinates
chr2:+:201392406..201399753
Molecular Weight (calculated)
28022.8 Da
IEP (calculated)
7.635
GRAVY (calculated)
-0.354
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLAAGAARR WDADDLRCVR ERTGGALLCG RRGCALPALR REVLILLIAD MCMAIEDYPF SQERISKAFT VHMCNKLASR HVRVGLADPN KLARCDICEN
101: SPAFFYCEID GTSLCLSCDM TVHVGGKRTH GRYLLLRQRV EFPGDKPGHM DDVPMEIKDP ENQREQNTPK EQMANHHNVN DPVSDGNCDG QGNIDSKMID
201: LNMRPARTHG QGSNSQELLG AEMGLFSGLS VITSKRISGR VGANNCISIR LVVP
101: SPAFFYCEID GTSLCLSCDM TVHVGGKRTH GRYLLLRQRV EFPGDKPGHM DDVPMEIKDP ENQREQNTPK EQMANHHNVN DPVSDGNCDG QGNIDSKMID
201: LNMRPARTHG QGSNSQELLG AEMGLFSGLS VITSKRISGR VGANNCISIR LVVP
001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KALHMRLDIS KCSESVKRVQ IVETSSLIWW IKMGTFCLQS LHLVVHMCNK LASRHVRVGL AEPSNAPCCD
101: ICENAPAFFY CEIDGSSLCL QCDMVVHVGG KRTHGRFLLL RQRIEFPGDK PKENNTRDNL QNQRVSTNGN GEANGKIDDE MIDLNANPQR VHEPSSNNNG
201: IDVNNENNHE PAGLVPVGPF KRESEK
101: ICENAPAFFY CEIDGSSLCL QCDMVVHVGG KRTHGRFLLL RQRIEFPGDK PKENNTRDNL QNQRVSTNGN GEANGKIDDE MIDLNANPQR VHEPSSNNNG
201: IDVNNENNHE PAGLVPVGPF KRESEK
Arabidopsis Description
B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.