Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010718.1-P | Field mustard | cytosol | 75.22 | 94.44 |
| CDY12111 | Canola | cytosol | 74.78 | 93.89 |
| CDX90301 | Canola | cytosol | 74.78 | 93.89 |
| CDX72726 | Canola | cytosol | 71.24 | 89.94 |
| Bra033588.1-P | Field mustard | cytosol | 72.12 | 89.56 |
| CDY22402 | Canola | plastid | 60.18 | 84.47 |
| Solyc02g084420.2.1 | Tomato | cytosol | 32.74 | 84.09 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 57.96 | 76.16 |
| VIT_03s0038g00690.t01 | Wine grape | cytosol | 56.19 | 60.48 |
| VIT_04s0023g03030.t01 | Wine grape | cytosol | 47.79 | 58.7 |
| PGSC0003DMT400008044 | Potato | cytosol | 54.87 | 58.49 |
| KRH28766 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 48.67 | 56.99 |
| PGSC0003DMT400009328 | Potato | cytosol | 45.58 | 56.59 |
| KRH29344 | Soybean | nucleus | 52.21 | 55.66 |
| KRH76689 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 51.33 | 55.24 |
| GSMUA_Achr10P... | Banana | cytosol | 50.44 | 54.81 |
| KRH24373 | Soybean | nucleus | 51.33 | 54.72 |
| Os09t0527900-01 | Rice | cytosol | 50.44 | 54.03 |
| Zm00001d021278_P001 | Maize | cytosol | 49.12 | 53.88 |
| EER97079 | Sorghum | cytosol | 49.12 | 52.61 |
| Solyc01g110370.2.1 | Tomato | cytosol | 54.42 | 51.04 |
| TraesCS5A01G317100.1 | Wheat | cytosol | 47.35 | 50.71 |
| TraesCS5B01G317700.1 | Wheat | cytosol | 47.35 | 50.71 |
| TraesCS5D01G323400.1 | Wheat | cytosol | 47.35 | 50.71 |
| GSMUA_Achr1P07770_001 | Banana | cytosol | 50.44 | 47.11 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 46.9 | 38.55 |
| Zm00001d006198_P001 | Maize | cytosol | 41.59 | 37.01 |
| AT4G10240.1 | Thale cress | nucleus | 23.45 | 32.72 |
| AT2G31380.1 | Thale cress | nucleus | 24.34 | 23.11 |
| AT1G06040.1 | Thale cress | nucleus | 23.89 | 21.77 |
| AT4G39070.1 | Thale cress | cytosol | 21.68 | 20.25 |
| AT1G78600.2 | Thale cress | nucleus | 25.66 | 18.18 |
| AT1G75540.1 | Thale cress | nucleus | 24.78 | 16.92 |
Protein Annotations
| MapMan:15.5.1.1 | EntrezGene:830051 | ProteinID:AEE87001.1 | ArrayExpress:AT4G38960 | EnsemblPlantsGene:AT4G38960 | RefSeq:AT4G38960 |
| TAIR:AT4G38960 | RefSeq:AT4G38960-TAIR-G | EnsemblPlants:AT4G38960.3 | TAIR:AT4G38960.3 | Unigene:At.72607 | UniProt:F4JUJ1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0007623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010228 | InterPro:IPR000315 | RefSeq:NP_001190958.1 | PFAM:PF00643 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF5 |
| SMART:SM00336 | UniParc:UPI0001E92FA2 | InterPro:Znf_B-box | SEG:seg | : | : |
Description
B-box type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:F4JUJ1]
Coordinates
chr4:+:18161088..18163321
Molecular Weight (calculated)
25118.0 Da
IEP (calculated)
6.294
GRAVY (calculated)
-0.377
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MRILCDACEN AAAIIFCAAD EAALCRPCDE KALHMRLDIS KCSESVKRVQ IVETSSLIWW IKMGTFCLQS LHLVVHMCNK LASRHVRVGL AEPSNAPCCD
101: ICENAPAFFY CEIDGSSLCL QCDMVVHVGG KRTHGRFLLL RQRIEFPGDK PKENNTRDNL QNQRVSTNGN GEANGKIDDE MIDLNANPQR VHEPSSNNNG
201: IDVNNENNHE PAGLVPVGPF KRESEK
101: ICENAPAFFY CEIDGSSLCL QCDMVVHVGG KRTHGRFLLL RQRIEFPGDK PKENNTRDNL QNQRVSTNGN GEANGKIDDE MIDLNANPQR VHEPSSNNNG
201: IDVNNENNHE PAGLVPVGPF KRESEK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.