Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008371.1-P | Field mustard | nucleus | 79.62 | 87.29 |
| CDY14607 | Canola | nucleus | 79.62 | 87.29 |
| CDX88458 | Canola | nucleus | 79.0 | 85.42 |
| CDY11657 | Canola | nucleus | 78.68 | 85.08 |
| CDY26870 | Canola | nucleus | 79.94 | 85.0 |
| Bra035051.1-P | Field mustard | nucleus | 77.74 | 84.93 |
| CDX87448 | Canola | nucleus | 77.74 | 84.93 |
| CDX79268 | Canola | nucleus | 75.24 | 83.33 |
| CDY69214 | Canola | nucleus | 74.61 | 82.64 |
| Bra003640.1-P | Field mustard | nucleus | 74.61 | 82.64 |
| HORVU7Hr1G023060.1 | Barley | cytosol, mitochondrion, nucleus | 17.24 | 76.39 |
| VIT_19s0014g00350.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 50.78 | 55.29 |
| Solyc07g062160.2.1 | Tomato | nucleus | 51.1 | 54.7 |
| PGSC0003DMT400018196 | Potato | nucleus | 50.78 | 54.36 |
| KRH21881 | Soybean | nucleus | 48.59 | 52.9 |
| Solyc12g005420.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 44.2 | 50.0 |
| PGSC0003DMT400048964 | Potato | nucleus | 46.71 | 49.83 |
| AT4G10240.1 | Thale cress | nucleus | 24.14 | 47.53 |
| GSMUA_Achr6P21590_001 | Banana | nucleus | 44.51 | 47.33 |
| GSMUA_Achr6P14750_001 | Banana | nucleus | 43.57 | 46.03 |
| KRH27404 | Soybean | extracellular, vacuole | 47.96 | 40.91 |
| TraesCS7B01G006400.1 | Wheat | nucleus | 41.07 | 38.76 |
| TraesCS7A01G108400.1 | Wheat | nucleus | 42.01 | 37.33 |
| Os06t0152200-01 | Rice | nucleus | 41.69 | 36.94 |
| AT1G06040.1 | Thale cress | nucleus | 28.53 | 36.69 |
| TraesCS7D01G103300.1 | Wheat | nucleus | 41.69 | 36.64 |
| KXG19323 | Sorghum | nucleus | 42.63 | 36.27 |
| AT2G31380.1 | Thale cress | nucleus | 26.96 | 36.13 |
| Zm00001d036214_P001 | Maize | nucleus | 42.95 | 35.49 |
| Zm00001d045323_P004 | Maize | nucleus | 44.2 | 33.41 |
| AT2G21320.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 17.55 | 32.56 |
| HORVU7Hr1G023100.2 | Barley | plastid | 40.13 | 31.84 |
| AT4G39070.1 | Thale cress | cytosol | 21.0 | 27.69 |
| AT1G75540.1 | Thale cress | nucleus | 28.21 | 27.19 |
| AT4G38960.3 | Thale cress | cytosol | 18.18 | 25.66 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | EntrezGene:844196 | ProteinID:AEE36126.1 | ArrayExpress:AT1G78600 | EnsemblPlantsGene:AT1G78600 |
| RefSeq:AT1G78600 | TAIR:AT1G78600 | RefSeq:AT1G78600-TAIR-G | EnsemblPlants:AT1G78600.2 | TAIR:AT1G78600.2 | Unigene:At.19261 |
| UniProt:F4IBS4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009641 | GO:GO:0009658 | GO:GO:0009718 | GO:GO:0009987 | GO:GO:0015995 | GO:GO:0016043 |
| GO:GO:0016607 | GO:GO:0043565 | GO:GO:0046872 | InterPro:IPR000315 | Symbol:LZF1 | RefSeq:NP_001185428.1 |
| PFAM:PF00643 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF31 | SMART:SM00336 | UniParc:UPI0001E92B0E |
| InterPro:Znf_B-box | SEG:seg | : | : | : | : |
Description
LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
Coordinates
chr1:+:29567106..29568815
Molecular Weight (calculated)
35081.1 Da
IEP (calculated)
6.560
GRAVY (calculated)
-0.594
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.