Factsheet for HORVU7Hr1G023060.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G103300.1	Wheat	nucleus	98.61	19.56
HORVU6Hr1G028150.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	58.33	19.53
TraesCS7B01G006400.1	Wheat	nucleus	91.67	19.53
GSMUA_Achr6P21590_001	Banana	nucleus	80.56	19.33
Bra035051.1-P	Field mustard	nucleus	75.0	18.49
CDX87448	Canola	nucleus	75.0	18.49
TraesCS7A01G108400.1	Wheat	nucleus	91.67	18.38
CDX88458	Canola	nucleus	75.0	18.31
CDY11657	Canola	nucleus	75.0	18.31
Bra008371.1-P	Field mustard	nucleus	73.61	18.21
CDY14607	Canola	nucleus	73.61	18.21
KRH21881	Soybean	nucleus	73.61	18.09
Bra003640.1-P	Field mustard	nucleus	72.22	18.06
Os06t0152200-01	Rice	nucleus	90.28	18.06
CDY69214	Canola	nucleus	72.22	18.06
CDX79268	Canola	nucleus	72.22	18.06
KRH37922	Soybean	nucleus	72.22	17.81
VIT_19s0014g00350.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	72.22	17.75
Solyc12g005420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	69.44	17.73
CDY26870	Canola	nucleus	73.61	17.67
HORVU7Hr1G023100.2	Barley	plastid	97.22	17.41
AT1G78600.2	Thale cress	nucleus	76.39	17.24
KXG19323	Sorghum	nucleus	88.89	17.07
PGSC0003DMT400048964	Potato	nucleus	70.83	17.06
GSMUA_Achr6P14750_001	Banana	nucleus	70.83	16.89
PGSC0003DMT400018196	Potato	nucleus	69.44	16.78
Solyc07g062160.2.1	Tomato	nucleus	69.44	16.78
Zm00001d036214_P001	Maize	nucleus	86.11	16.06
Zm00001d045323_P004	Maize	nucleus	90.28	15.4
KRH27404	Soybean	extracellular, vacuole	73.61	14.17
HORVU3Hr1G026500.4	Barley	nucleus	68.06	14.04
HORVU2Hr1G092460.9	Barley	cytosol, mitochondrion, nucleus	54.17	13.68
HORVU7Hr1G091180.1	Barley	nucleus	51.39	13.45
HORVU5Hr1G081190.1	Barley	cytosol, nucleus, plastid	36.11	9.45

Protein Annotations

EnsemblPlants:HORVU7Hr1G023060.1	EnsemblPlantsGene:HORVU7Hr1G023060	Gene3D:3.30.40.200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31832
PANTHER:PTHR31832:SF32	PFAM:PF00643	PFscan:PS50119	SEG:seg	SMART:SM00336	MapMan:15.5.1.1

Description

No Description!

Coordinates

chrchr7H:-:34771324..34773069

Molecular Weight (calculated)

7888.5 Da

IEP (calculated)

7.411

GRAVY (calculated)

0.085

Length

72 amino acids

Sequence
(BLAST)

1: VHAANRLAAK HQRVPLLPDA APNAAAPPKC DICQEASGYF FCLEDRALLC RDCDVAIHTV NSFVSAHQRF LL

Best Arabidopsis Sequence Match ( AT1G78600.2 )
(BLAST)

001: MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT
101: GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ
201: SYEYMENNGS SKTDVLKMKL LDSACLGKKL EKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH SVFVPDITSS
301: TPYTGSSPNQ RVGKRRRRF

Arabidopsis Description

LZF1Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.