Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 3
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G172300.1 | Wheat | nucleus | 95.35 | 95.79 |
| TraesCS6A01G143900.1 | Wheat | nucleus | 94.88 | 95.33 |
| TraesCS6D01G133100.1 | Wheat | nucleus | 94.88 | 95.33 |
| Os12t0209200-01 | Rice | cytosol | 62.33 | 63.81 |
| HORVU7Hr1G023060.1 | Barley | cytosol, mitochondrion, nucleus | 19.53 | 58.33 |
| EES15831 | Sorghum | nucleus | 57.21 | 50.2 |
| HORVU3Hr1G026500.4 | Barley | nucleus | 39.53 | 24.36 |
| HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 31.63 | 23.86 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 28.84 | 22.55 |
| HORVU7Hr1G023100.2 | Barley | plastid | 39.07 | 20.9 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 25.12 | 19.64 |
Protein Annotations
| EMBL:AK358383 | EnsemblPlants:HORVU6Hr1G028150.2 | EnsemblPlantsGene:HORVU6Hr1G028150 | Gene3D:3.30.40.200 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31832 | PFAM:PF00643 | PFscan:PS50119 | SEG:seg | SMART:SM00336 | UniParc:UPI000200547E |
| UniProt:F2D3C6 | MapMan:15.5.1.1 | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D3C6]
Coordinates
chrchr6H:-:111628706..111630136
Molecular Weight (calculated)
22204.6 Da
IEP (calculated)
4.700
GRAVY (calculated)
-0.256
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMKIGCDAC GQAEAAVLCC ADEAALCRRC DAAVHSANKL AGRHHRVALL SSTTPAGSSS PGTGDDGGSH PACDICQEKT GYFFCVEDRA LLCRSCDVAV
101: HTATPHASTH RRFLITGVRV GVDQDHIGDV SGATVVSPSS SSANGSNSMP TSENFAIANG QRSEDGAGLI GGGEDDIGQQ QQWPWSDIFA DDGVGMDQHQ
201: CYPGFSEPGS SSLTG
101: HTATPHASTH RRFLITGVRV GVDQDHIGDV SGATVVSPSS SSANGSNSMP TSENFAIANG QRSEDGAGLI GGGEDDIGQQ QQWPWSDIFA DDGVGMDQHQ
201: CYPGFSEPGS SSLTG
001: MKIQCEVCEK AEAEVLCCSD EAVLCKPCDI KVHEANKLFQ RHHRVALQKD AASATTASGA PLCDICQERK GYFFCLEDRA MLCNDCDEAI HTCNSHQRFL
101: LSGVQVSDQS LTENSECSTS FSSETYQIQS KVSLNSQYSS EETEAGNSGE IVHKNPSVIL SP
101: LSGVQVSDQS LTENSECSTS FSSETYQIQS KVSLNSQYSS EETEAGNSGE IVHKNPSVIL SP
Arabidopsis Description
BBX23Bbx23 [Source:UniProtKB/TrEMBL;Acc:A0A178UTH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.