Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G388500.1 | Wheat | nucleus | 79.3 | 87.6 |
| TraesCS2D01G386300.1 | Wheat | nucleus | 78.25 | 85.11 |
| TraesCS2B01G406600.2 | Wheat | nucleus | 78.6 | 84.53 |
| Os04t0540200-01 | Rice | nucleus | 61.05 | 69.6 |
| OQU82040 | Sorghum | nucleus | 61.05 | 65.66 |
| Zm00001d002806_P001 | Maize | nucleus | 58.95 | 65.12 |
| Zm00001d025957_P001 | Maize | nucleus | 57.89 | 64.45 |
| HORVU7Hr1G023060.1 | Barley | cytosol, mitochondrion, nucleus | 13.68 | 54.17 |
| Solyc01g110180.2.1 | Tomato | nucleus | 32.28 | 45.32 |
| CDY41957 | Canola | nucleus | 30.53 | 41.04 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 37.54 | 38.91 |
| CDY42602 | Canola | nucleus | 31.93 | 38.89 |
| KRH51476 | Soybean | nucleus | 31.23 | 38.2 |
| Bra011879.1-P | Field mustard | nucleus | 31.93 | 38.08 |
| KRH51757 | Soybean | nucleus | 32.63 | 37.96 |
| CDY12117 | Canola | nucleus | 31.58 | 37.19 |
| CDX90306 | Canola | nucleus | 31.23 | 36.93 |
| Bra010713.1-P | Field mustard | nucleus | 31.23 | 36.93 |
| PGSC0003DMT400079507 | Potato | nucleus | 32.63 | 36.9 |
| AT4G39070.1 | Thale cress | cytosol | 31.23 | 36.78 |
| VIT_18s0001g13520.t01 | Wine grape | nucleus | 37.89 | 35.64 |
| KRH17384 | Soybean | nucleus | 34.39 | 35.51 |
| KRH61078 | Soybean | nucleus | 31.93 | 34.21 |
| Solyc04g081020.2.1 | Tomato | nucleus | 35.79 | 34.11 |
| PGSC0003DMT400009514 | Potato | nucleus | 35.44 | 33.89 |
| Bra008204.1-P | Field mustard | nucleus | 35.79 | 33.77 |
| VIT_03s0038g00340.t01 | Wine grape | nucleus | 34.74 | 32.78 |
| CDY39040 | Canola | nucleus | 33.68 | 32.65 |
| CDY13564 | Canola | nucleus | 34.39 | 32.34 |
| KRH29378 | Soybean | nucleus | 32.63 | 32.29 |
| CDX73178 | Canola | nucleus | 36.14 | 31.99 |
| Bra015835.1-P | Field mustard | nucleus | 35.79 | 31.78 |
| CDY47514 | Canola | nucleus | 35.79 | 31.78 |
| HORVU6Hr1G028150.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 23.86 | 31.63 |
| KRH05902 | Soybean | nucleus | 35.79 | 31.19 |
| CDX68124 | Canola | nucleus | 34.39 | 30.72 |
| CDX85903 | Canola | nucleus | 34.39 | 30.72 |
| AT1G75540.1 | Thale cress | nucleus | 35.44 | 30.51 |
| Bra003748.1-P | Field mustard | nucleus | 34.04 | 30.41 |
| Solyc12g089240.1.1 | Tomato | nucleus | 35.09 | 30.4 |
| PGSC0003DMT400075652 | Potato | nucleus | 35.09 | 30.3 |
| KRH24393 | Soybean | nucleus | 21.05 | 29.27 |
| KRH60788 | Soybean | nucleus | 31.23 | 27.9 |
| HORVU3Hr1G026500.4 | Barley | nucleus | 28.77 | 23.5 |
| HORVU5Hr1G081190.1 | Barley | cytosol, nucleus, plastid | 21.4 | 22.18 |
| HORVU7Hr1G023100.2 | Barley | plastid | 28.07 | 19.9 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | UniProt:A0A287IYI0 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | EnsemblPlantsGene:HORVU2Hr1G092460 | EnsemblPlants:HORVU2Hr1G092460.9 | InterPro:IPR000315 |
| PFAM:PF00643 | PFscan:PS50119 | PANTHER:PTHR31832 | PANTHER:PTHR31832:SF10 | SMART:SM00336 | UniParc:UPI000B4872C5 |
| InterPro:Znf_B-box | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:653533286..653534975
Molecular Weight (calculated)
30640.6 Da
IEP (calculated)
6.092
GRAVY (calculated)
-0.435
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: PRYWTRDLPC PSLSLSLSLS PAPSISRAVD WRDRAMKVQC DVCEAEAATV FCCADEAALC GACDRRVHRA NKLAGKHRRL SLLDPSPSSS SSPSSKSPLC
101: DICQEKRGFL FCKEDRAILC RECDVKVHTV SELTRRHGRF LLTGVRVSSA PAETPAPSGL EEEENSTSPC DADDSCSGDA SASASDGSSI SEYLTKTLPG
201: WHVEDFLLDD AAVDVSSNNK PYHQGGGQQE GYPAWAGHGQ VIGGVVVAAG ERARQELWVP QMHAEAGWAG SKRPRASSLG SSSYW
101: DICQEKRGFL FCKEDRAILC RECDVKVHTV SELTRRHGRF LLTGVRVSSA PAETPAPSGL EEEENSTSPC DADDSCSGDA SASASDGSSI SEYLTKTLPG
201: WHVEDFLLDD AAVDVSSNNK PYHQGGGQQE GYPAWAGHGQ VIGGVVVAAG ERARQELWVP QMHAEAGWAG SKRPRASSLG SSSYW
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.