Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015835.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX73178 | Canola | nucleus | 96.57 | 96.27 |
| CDY13564 | Canola | nucleus | 80.69 | 85.48 |
| CDX85903 | Canola | nucleus | 84.74 | 85.27 |
| CDX68124 | Canola | nucleus | 84.11 | 84.64 |
| CDY39040 | Canola | nucleus | 74.14 | 80.95 |
| KRH17384 | Soybean | nucleus | 46.73 | 54.35 |
| VIT_18s0001g13520.t01 | Wine grape | nucleus | 50.78 | 53.8 |
| KRH51757 | Soybean | nucleus | 39.88 | 52.24 |
| Zm00001d017412_P001 | Maize | nucleus | 22.74 | 51.41 |
| GSMUA_Achr4P05180_001 | Banana | cytosol | 32.09 | 50.74 |
| GSMUA_Achr9P20930_001 | Banana | cytosol | 29.28 | 50.54 |
| PGSC0003DMT400009514 | Potato | nucleus | 46.73 | 50.34 |
| Solyc04g081020.2.1 | Tomato | nucleus | 46.73 | 50.17 |
| KRH61078 | Soybean | nucleus | 40.5 | 48.87 |
| CDY41957 | Canola | nucleus | 32.09 | 48.58 |
| GSMUA_Achr11P... | Banana | nucleus | 27.73 | 48.11 |
| GSMUA_Achr11P... | Banana | cytosol | 29.28 | 47.47 |
| CDY42602 | Canola | nucleus | 33.96 | 46.58 |
| KRH05902 | Soybean | nucleus | 46.73 | 45.87 |
| CDY12117 | Canola | nucleus | 34.58 | 45.87 |
| CDX90306 | Canola | nucleus | 33.96 | 45.23 |
| PGSC0003DMT400075652 | Potato | nucleus | 46.42 | 45.15 |
| Solyc12g089240.1.1 | Tomato | nucleus | 46.11 | 44.98 |
| TraesCS6A01G239300.1 | Wheat | nucleus | 32.4 | 44.07 |
| TraesCS6B01G285200.1 | Wheat | nucleus | 32.4 | 43.7 |
| TraesCS6D01G221700.1 | Wheat | nucleus | 32.09 | 43.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.45 | 42.09 |
| Os04t0540200-01 | Rice | nucleus | 32.71 | 42.0 |
| GSMUA_Achr11P... | Banana | nucleus | 34.27 | 41.98 |
| Zm00001d025957_P001 | Maize | nucleus | 32.71 | 41.02 |
| Os02t0646200-01 | Rice | nucleus | 34.27 | 40.89 |
| TraesCS2A01G388500.1 | Wheat | nucleus | 32.71 | 40.7 |
| Zm00001d002806_P001 | Maize | nucleus | 32.4 | 40.31 |
| TraesCS2D01G386300.1 | Wheat | nucleus | 32.4 | 39.69 |
| OQU82040 | Sorghum | nucleus | 32.71 | 39.62 |
| Zm00001d051309_P001 | Maize | nucleus | 33.96 | 39.35 |
| CDX99534 | Canola | nucleus | 19.31 | 38.99 |
| CDX86867 | Canola | nucleus | 19.31 | 38.99 |
| EES07539 | Sorghum | nucleus | 35.51 | 38.64 |
| TraesCS2B01G406600.2 | Wheat | nucleus | 31.78 | 38.49 |
| HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 31.78 | 35.79 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 30.53 | 35.64 |
| CDX86539 | Canola | nucleus | 26.48 | 35.27 |
| CDY06194 | Canola | nucleus | 25.55 | 35.04 |
| TraesCS7D01G379900.1 | Wheat | nucleus | 30.84 | 34.74 |
| CDY15558 | Canola | nucleus | 25.86 | 34.58 |
| CDY09992 | Canola | nucleus | 24.92 | 34.04 |
| Os06t0713000-01 | Rice | nucleus | 32.09 | 33.44 |
| Zm00001d036418_P001 | Maize | nucleus | 27.41 | 32.71 |
| TraesCS7B01G286300.1 | Wheat | nucleus | 31.46 | 32.48 |
| TraesCS7A01G383400.3 | Wheat | nucleus | 31.15 | 31.95 |
| CDY19093 | Canola | nucleus | 23.68 | 31.8 |
| CDY12111 | Canola | cytosol | 17.45 | 31.11 |
| CDX90301 | Canola | cytosol | 17.45 | 31.11 |
| CDX79268 | Canola | nucleus | 27.73 | 30.9 |
| CDX87448 | Canola | nucleus | 28.04 | 30.82 |
| CDY15382 | Canola | nucleus | 23.05 | 30.58 |
| EER90373 | Sorghum | cytosol | 28.97 | 30.49 |
| CDX82018 | Canola | cytosol | 17.76 | 30.48 |
| CDY56613 | Canola | nucleus | 23.05 | 30.45 |
| CDY14607 | Canola | nucleus | 27.41 | 30.24 |
| CDY69214 | Canola | nucleus | 27.1 | 30.21 |
| CDY11657 | Canola | nucleus | 27.73 | 30.17 |
| CDX88458 | Canola | nucleus | 27.73 | 30.17 |
| CDX72726 | Canola | cytosol | 16.82 | 30.17 |
| CDY10800 | Canola | nucleus | 22.74 | 30.04 |
| CDY26870 | Canola | nucleus | 27.73 | 29.67 |
| GSMUA_Achr1P07740_001 | Banana | nucleus | 35.51 | 29.08 |
| GSMUA_Achr4P04990_001 | Banana | extracellular, golgi | 33.64 | 28.2 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 30.22 | 27.32 |
| CDY22402 | Canola | plastid | 12.15 | 24.22 |
Protein Annotations
| MapMan:15.5.1.1 | Gene3D:3.30.40.200 | GO:A0A078IDU4 | UniProt:A0A078IDU4 | EnsemblPlants:CDY47514 | ProteinID:CDY47514 |
| ProteinID:CDY47514.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00087574001 | InterPro:IPR000315 | PFAM:PF00643 | PFscan:PS50119 |
| PANTHER:PTHR31832 | PANTHER:PTHR31832:SF6 | SMART:SM00336 | UniParc:UPI0002541F81 | InterPro:Znf_B-box | SEG:seg |
Description
BnaAnng09120DBnaAnng09120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDU4]
Coordinates
chrLK032719:-:82575..84121
Molecular Weight (calculated)
35798.7 Da
IEP (calculated)
7.013
GRAVY (calculated)
-0.700
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRCDVCDK EEASVFCTAD EASLCDGCDH RVHHANKLAS KHLRFSLLYP SSSKNSSPIC DICQEKKALL FCQQDRAILC KDCDSSIHSA NEHTKKHDRF
101: LLTGVKLSPT SSVYKPTTES PSSSQDCSVP SPLKKPISAP QSQIKNSKIQ PSKISSDVGM NQWGSTSTIS EYLIDTLPGW HVEDFLDSSL PPFGFSKSGD
201: DDGVLPFMEA EDDSTKRNNN NTVSLPSKNM GIWVPQIPQT LPSSYTNQYF PHDNNNIQFG MYNNKETSHG VDTYAPIQNM KQQGQNKRWY DDGGFTVPQM
301: TTTTTSTFTP LASNKRSRSF W
101: LLTGVKLSPT SSVYKPTTES PSSSQDCSVP SPLKKPISAP QSQIKNSKIQ PSKISSDVGM NQWGSTSTIS EYLIDTLPGW HVEDFLDSSL PPFGFSKSGD
201: DDGVLPFMEA EDDSTKRNNN NTVSLPSKNM GIWVPQIPQT LPSSYTNQYF PHDNNNIQFG MYNNKETSHG VDTYAPIQNM KQQGQNKRWY DDGGFTVPQM
301: TTTTTSTFTP LASNKRSRSF W
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.