Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015835.1-P | Field mustard | nucleus | 96.27 | 96.57 |
| CDY47514 | Canola | nucleus | 96.27 | 96.57 |
| CDX85903 | Canola | nucleus | 84.16 | 84.95 |
| CDY13564 | Canola | nucleus | 79.81 | 84.82 |
| CDX68124 | Canola | nucleus | 83.54 | 84.33 |
| CDY39040 | Canola | nucleus | 72.98 | 79.93 |
| KRH17384 | Soybean | nucleus | 45.96 | 53.62 |
| VIT_18s0001g13520.t01 | Wine grape | nucleus | 49.38 | 52.48 |
| GSMUA_Achr4P05180_001 | Banana | cytosol | 32.61 | 51.72 |
| KRH51757 | Soybean | nucleus | 39.13 | 51.43 |
| GSMUA_Achr9P20930_001 | Banana | cytosol | 29.5 | 51.08 |
| Zm00001d017412_P001 | Maize | nucleus | 22.36 | 50.7 |
| PGSC0003DMT400009514 | Potato | nucleus | 46.27 | 50.0 |
| Solyc04g081020.2.1 | Tomato | nucleus | 46.27 | 49.83 |
| GSMUA_Achr11P... | Banana | nucleus | 27.95 | 48.65 |
| KRH61078 | Soybean | nucleus | 39.75 | 48.12 |
| CDY41957 | Canola | nucleus | 31.68 | 48.11 |
| GSMUA_Achr11P... | Banana | cytosol | 29.5 | 47.98 |
| CDY42602 | Canola | nucleus | 33.23 | 45.73 |
| CDY12117 | Canola | nucleus | 34.16 | 45.45 |
| KRH05902 | Soybean | nucleus | 45.96 | 45.26 |
| PGSC0003DMT400075652 | Potato | nucleus | 45.96 | 44.85 |
| CDX90306 | Canola | nucleus | 33.54 | 44.81 |
| Solyc12g089240.1.1 | Tomato | nucleus | 45.65 | 44.68 |
| TraesCS6A01G239300.1 | Wheat | nucleus | 31.99 | 43.64 |
| TraesCS6B01G285200.1 | Wheat | nucleus | 31.99 | 43.28 |
| TraesCS6D01G221700.1 | Wheat | nucleus | 31.68 | 42.86 |
| Os04t0540200-01 | Rice | nucleus | 32.92 | 42.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.34 | 42.09 |
| GSMUA_Achr11P... | Banana | nucleus | 33.85 | 41.6 |
| TraesCS2A01G388500.1 | Wheat | nucleus | 32.92 | 41.09 |
| Zm00001d025957_P001 | Maize | nucleus | 32.61 | 41.02 |
| Os02t0646200-01 | Rice | nucleus | 33.85 | 40.52 |
| Zm00001d002806_P001 | Maize | nucleus | 32.3 | 40.31 |
| TraesCS2D01G386300.1 | Wheat | nucleus | 32.61 | 40.08 |
| CDX99534 | Canola | nucleus | 19.57 | 39.62 |
| OQU82040 | Sorghum | nucleus | 32.61 | 39.62 |
| CDX86867 | Canola | nucleus | 19.57 | 39.62 |
| Zm00001d051309_P001 | Maize | nucleus | 33.85 | 39.35 |
| TraesCS2B01G406600.2 | Wheat | nucleus | 31.99 | 38.87 |
| EES07539 | Sorghum | nucleus | 35.4 | 38.64 |
| HORVU2Hr1G092460.9 | Barley | cytosol, mitochondrion, nucleus | 31.99 | 36.14 |
| CDY06194 | Canola | nucleus | 25.47 | 35.04 |
| CDX86539 | Canola | nucleus | 26.09 | 34.85 |
| HORVU7Hr1G091180.1 | Barley | nucleus | 29.5 | 34.55 |
| CDY15558 | Canola | nucleus | 25.47 | 34.17 |
| CDY09992 | Canola | nucleus | 24.84 | 34.04 |
| TraesCS7D01G379900.1 | Wheat | nucleus | 30.12 | 34.04 |
| Os06t0713000-01 | Rice | nucleus | 32.3 | 33.77 |
| Zm00001d036418_P001 | Maize | nucleus | 27.95 | 33.46 |
| TraesCS7B01G286300.1 | Wheat | nucleus | 30.75 | 31.83 |
| CDY19093 | Canola | nucleus | 23.29 | 31.38 |
| TraesCS7A01G383400.3 | Wheat | nucleus | 30.43 | 31.31 |
| CDY12111 | Canola | cytosol | 17.39 | 31.11 |
| CDX90301 | Canola | cytosol | 17.39 | 31.11 |
| CDY56613 | Canola | nucleus | 23.29 | 30.86 |
| EER90373 | Sorghum | cytosol | 28.88 | 30.49 |
| CDX82018 | Canola | cytosol | 17.7 | 30.48 |
| CDY10800 | Canola | nucleus | 22.98 | 30.45 |
| CDX72726 | Canola | cytosol | 16.77 | 30.17 |
| CDY15382 | Canola | nucleus | 22.67 | 30.17 |
| CDY14607 | Canola | nucleus | 27.02 | 29.9 |
| CDX79268 | Canola | nucleus | 26.71 | 29.86 |
| CDX87448 | Canola | nucleus | 27.02 | 29.79 |
| GSMUA_Achr1P07740_001 | Banana | nucleus | 35.71 | 29.34 |
| CDY26870 | Canola | nucleus | 27.33 | 29.33 |
| CDY69214 | Canola | nucleus | 26.09 | 29.17 |
| CDX88458 | Canola | nucleus | 26.71 | 29.15 |
| CDY11657 | Canola | nucleus | 26.71 | 29.15 |
| GSMUA_Achr4P04990_001 | Banana | extracellular, golgi | 33.54 | 28.2 |
| Zm00001d014765_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 30.75 | 27.89 |
| CDY22402 | Canola | plastid | 12.11 | 24.22 |
Protein Annotations
| EnsemblPlants:CDX73178 | EnsemblPlantsGene:GSBRNA2T00103667001 | Gene3D:3.30.40.200 | GO:A0A078CE19 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31832 | PANTHER:PTHR31832:SF6 | PFAM:PF00643 | PFscan:PS50119 | ProteinID:CDX73178 | ProteinID:CDX73178.1 |
| SEG:seg | SMART:SM00336 | UniParc:UPI000189D254 | MapMan:15.5.1.1 | : | : |
Description
BnaC06g36260D
Coordinates
chrLK031797:+:2536164..2537714
Molecular Weight (calculated)
35777.8 Da
IEP (calculated)
7.456
GRAVY (calculated)
-0.679
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRCDVCDK EEASVFCTAD EASLCDGCDH RVHHANKLAS KHLRFSLLYP SSSKISSPIC DICQEKKALL FCQQDRAILC KDCDSSIHSA NEHTKKHDRF
101: LLTGVKLSPA SSVYKPTTES PSSSQDCSVP APSKKPISAP QSQIKNSKIQ PSKISSDVGM NQWGSTSTIS EYLIDTLPGW HVEDFLDSSL PPFGFSKSGD
201: DDGVLPFMEA EGDSTKRNNN NTVSLPSKNM GIWVPQVPQT LPSSYTNQYF PRDNNNIQFG MYNNKETSHG VETYAPVQNM KQQGQNKRWY DDGGFTVPQM
301: TTTTSTFTHP PLASNKKSRS FW
101: LLTGVKLSPA SSVYKPTTES PSSSQDCSVP APSKKPISAP QSQIKNSKIQ PSKISSDVGM NQWGSTSTIS EYLIDTLPGW HVEDFLDSSL PPFGFSKSGD
201: DDGVLPFMEA EGDSTKRNNN NTVSLPSKNM GIWVPQVPQT LPSSYTNQYF PRDNNNIQFG MYNNKETSHG VETYAPVQNM KQQGQNKRWY DDGGFTVPQM
301: TTTTSTFTHP PLASNKKSRS FW
001: MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
101: LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP
201: TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ
301: NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W
Arabidopsis Description
BBX21B-box zinc finger protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.